![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.009G160900.1 |
Common Name | PHAVU_009G160900g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
LFY |
Protein Properties |
Length: 405aa MW: 45618.3 Da PI: 6.4368 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G160900.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Pvu&pid=Phvul.009G160900.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 648.9 | 7.2e-198 | 1 | 390 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaa....aapp...arlleeaavseap...leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdm 81
mdp+af+aslfkwdpr++ p ll + av+++p + + a aa r+l +leelf+ayG+ry+t+akiaelGftvstLvdm
Phvul.009G160900.1 1 MDPDAFTASLFKWDPRTVLpaapP--PrppPPLL-DYAVAPPPvapAYHLARAAPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDM 88
9***************99865331..24323343.444444443324444555556688******************************** PP
FLO_LFY 82 kdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglseepvqe.ekeaagsggeglg 169
kdeeldd+m+sls+ifr+dllvGeryGikaavraerrr++++e +++ +lls+d++t aldalsqeglseepv + ekea+gsgg++
Phvul.009G160900.1 89 KDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDDDEIKRRNSNLLSTDTTTtnALDALSQEGLSEEPVVQrEKEAVGSGGGS-- 177
*******************************************999999999998876669*************999677788888877.. PP
FLO_LFY 170 eaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCr 260
++e+vaaee++++++++++ + k + ++e+++ + edee ee+e++++++ +g erqrehPfivtepgevargkknGLDYLf+LyeqCr
Phvul.009G160900.1 178 TWEVVAAEERRKQQRRRRT---RMKANLQQEENE-DVEDEEGEENEEGNNNSGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCR 264
9****99965554444444...333333333222.233444455555566666789*********************************** PP
FLO_LFY 261 efLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarq 351
efL+qvq+iak+rGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLde+ sn+lrrafkergenvGawrqacykplvaiaarq
Phvul.009G160900.1 265 EFLMQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDVSNELRRAFKERGENVGAWRQACYKPLVAIAARQ 355
******************************************************************************************* PP
FLO_LFY 352 gwdidavfnahprLsiWYvPtkLrqLChlerskas 386
gwdida+fnahprLsiWYvPtkLrqLCh+er++a+
Phvul.009G160900.1 356 GWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAA 390
*******************************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MDPDAFTASL FKWDPRTVLP AAPPPRPPPP LLDYAVAPPP VAPAYHLARA APRELGGLEE 60 LFQAYGIRYY TAAKIAELGF TVSTLVDMKD EELDDMMNSL SQIFRWDLLV GERYGIKAAV 120 RAERRRIDDD EIKRRNSNLL STDTTTTNAL DALSQEGLSE EPVVQREKEA VGSGGGSTWE 180 VVAAEERRKQ QRRRRTRMKA NLQQEENEDV EDEEGEENEE GNNNSGGGCE RQREHPFIVT 240 EPGEVARGKK NGLDYLFHLY EQCREFLMQV QAIAKDRGEK CPTKVTNQVF RYAKKAGASY 300 INKPKMRHYV HCYALHCLDE DVSNELRRAF KERGENVGAW RQACYKPLVA IAARQGWDID 360 AIFNAHPRLS IWYVPTKLRQ LCHAERNSAA ASSSVSVGSA HLPF*
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Functional Description ? help
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Source |
Description |
UniProt | May regulate indeterminacy during leaf and flower development. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | DQ448810 | 0.0 | DQ448810.1 Glycine max LEAFY-like protein (LFY) mRNA, LFY-1 allele, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-144 | floral meristem identity control protein LEAFY (LFY) |