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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G270500.2 |
Common Name | PHAVU_008G270500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 453aa MW: 49659.6 Da PI: 6.5045 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G270500.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 78.4 | 7.8e-25 | 238 | 292 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
Dg++WrKYGqK+ kg+++pr+YYrCt++ Cpv +r+aed +vv++tYeg+Hnh
Phvul.008G270500.2 238 ADGCQWRKYGQKMAKGNPCPRAYYRCTMSsACPV----QRCAEDRSVVITTYEGQHNHA 292
7***************************989995....67999***************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 453 aa
Download sequence Send
to blast |
MEPSSNHAIP HPSSHPLLSF RGTPLHMDAL DFFPQKTKEI QDHDHTHHHQ TLHYHVDTSL 60 DLLTKNTGGN RSMEENEALE TVDEKSRFVA MVSELHQMNA ENQRLRELVD EMNNNCNALR 120 MQLINITQKQ HNQGNNGVSG EKEEMVPRPF LEMGVSEKEE QPSEEKVKVD LMHQCKGSDQ 180 KEIEDKLDCG RESSKARMEA DQQLSTKLSK LDQNSETLSM IKKARVSVRA RSDSTMIADG 240 CQWRKYGQKM AKGNPCPRAY YRCTMSSACP VQRCAEDRSV VITTYEGQHN HALPPTAQAM 300 AATTSAAASM LLSGSMPSSD GQINPTMLQS ASLPCSQNMA TLSASAPFPT ITLDLTQNPT 360 NQLGLLSPLL ARKFMSVPKI FGHSLCDQTK LAGLHESQGR DSSPSFANSF NAATAAITAD 420 PNFTAALVAA ITSVMGNSHN NSTGEEHCNN NA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 1e-107 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |