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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G064800.1 |
Common Name | PHAVU_003G064800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ERF |
Protein Properties |
Length: 365aa MW: 40165.7 Da PI: 7.1374 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G064800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.8 | 2.3e-17 | 45 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g
Phvul.003G064800.1 45 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 94
59*******.**********93....35999**********************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009733 | Biological Process | response to auxin |
GO:0009880 | Biological Process | embryonic pattern specification |
GO:0048825 | Biological Process | cotyledon development |
GO:0051726 | Biological Process | regulation of cell cycle |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 365 aa
Download sequence Send
to blast |
MEEALRRLNG VTPSQEPDLV SDPHPKKCAA KRTLRDTANS GTAMRYRGVR RRPWGRYAAE 60 IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGVKARTN FVYPDAADPH LFHPFNLPKH 120 CHVSRFPHNT NLGSDFPASS HHSASSSSSS LNMLLFRDFL NSSSNPCLLS SAPSQQFHNN 180 KSASCYVNSS SPSLSSSTAT NCLQGCCVGN ANSYNNAVSA NHGAEVAEVI DEDSDFFLRE 240 SSDSGLLEEI VHKFLPKSKP KVETSTVAQS FPESVPQPIF DHVVVSASKG YADSRMRVPK 300 VDGFGVCYDS PMQQFEALSG FNAMQGMSSI QRDNQFMMNH IAGFSGIEDY LQYPELFNSF 360 ATRM*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |