PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Pgl004467 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||||||
Protein Properties | Length: 337aa MW: 37141.9 Da PI: 4.1084 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.4 | 2.6e-21 | 3 | 53 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y GVr++k +g+W+AeIrdps+ r +lg+f+taeeAa+a+++a++k++g Pgl004467 3 CRYEGVRRRK-WGKWAAEIRDPSK---GVRLWLGTFDTAEEAAQAYDEAARKIRG 53 68*****998.**********965...4*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.23E-33 | 3 | 60 | No hit | No description |
Pfam | PF00847 | 2.9E-14 | 3 | 53 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.5E-35 | 4 | 67 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.367 | 4 | 61 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.36E-22 | 4 | 61 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-30 | 4 | 61 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-10 | 5 | 16 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-10 | 27 | 43 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence Send to blast |
KSCRYEGVRR RKWGKWAAEI RDPSKGVRLW LGTFDTAEEA AQAYDEAARK IRGPSAPTNF 60 LSKRSEIVDV EHPVSPKMPR KPVKKGIYDS GKEYYLSQTR SKGLDAKVSG KEYISAVLDG 120 PTEAADVLSS SSDFFSCISE ENLDASLVAS PSSVLEVSTL VCPEFEEELE HIFSFSGNLI 180 GLDVSGQLIE PSQQAGFSVQ CEGNHLPASQ QANSSEGSCF SSEVSNFPSV DDLLTTNYPD 240 GQNGEQQFNS IRQDNFLTFV IDSLLLSFFA TGEEHCYDDA HLSALEDNYF MEEFGQGFDI 300 SECGNEKDLA SLSNSIDLLD FDLDPEALEW MGLCDCN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-19 | 5 | 60 | 3 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.1 | 3e-18 | ERF family protein |