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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf04920g00003.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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| Family |
M-type_MADS |
| Protein Properties |
Length: 289aa MW: 33252.3 Da PI: 9.2507 |
| Description |
M-type_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf04920g00003.1 | genome | SGN | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 25.7 | 1.5e-08 | 16 | 59 | 2 | 45 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
+ien+ +tfskRr g+ KK + L + + ++ +i+fs+t k
Peinf101Scf04920g00003.1 16 KIENEDDCFTTFSKRRSGLYKKVSKLVIQYNLDIGIILFSPTEK 59
599999999********************************987 PP
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| 2 | SRF-TF | 28.3 | 2.2e-09 | 131 | 172 | 4 | 45 |
-SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
SRF-TF 4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
en+ +tfskRr g+ KK +EL + + ++ +i+fs+t k
Peinf101Scf04920g00003.1 131 ENEDDCFTTFSKRRSGLYKKVSELVIQYNLDIGIILFSPTEK 172
56666679*******************************987 PP
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| Protein Features
? help Back to Top |
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| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| PROSITE profile | PS50066 | 15.979 | 7 | 63 | IPR002100 | Transcription factor, MADS-box |
| SMART | SM00432 | 1.5E-11 | 7 | 66 | IPR002100 | Transcription factor, MADS-box |
| SuperFamily | SSF55455 | 2.22E-16 | 8 | 77 | IPR002100 | Transcription factor, MADS-box |
| PRINTS | PR00404 | 4.5E-8 | 9 | 29 | IPR002100 | Transcription factor, MADS-box |
| Pfam | PF00319 | 1.5E-14 | 16 | 63 | IPR002100 | Transcription factor, MADS-box |
| PRINTS | PR00404 | 4.5E-8 | 29 | 44 | IPR002100 | Transcription factor, MADS-box |
| PRINTS | PR00404 | 4.5E-8 | 44 | 65 | IPR002100 | Transcription factor, MADS-box |
| SMART | SM00432 | 4.4E-5 | 121 | 179 | IPR002100 | Transcription factor, MADS-box |
| SuperFamily | SSF55455 | 2.35E-14 | 126 | 190 | IPR002100 | Transcription factor, MADS-box |
| PROSITE profile | PS50066 | 12.741 | 126 | 176 | IPR002100 | Transcription factor, MADS-box |
| Pfam | PF00319 | 2.0E-14 | 131 | 176 | IPR002100 | Transcription factor, MADS-box |
| Sequence ? help Back to Top |
| Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MEGKMTKGRK KISMVKIENE DDCFTTFSKR RSGLYKKVSK LVIQYNLDIG IILFSPTEKP 60
FSFFHLTPEA IIDRFLYPTM QLSESTRLVA AHARSKVNQL NAMNEELNKK EAALSALALE 120
FDKMKEISAR ENEDDCFTTF SKRRSGLYKK VSELVIQYNL DIGIILFSPT EKPFSFFHLT 180
PEAIIDRFLY PTMQLSESTR LVAAHARSKV NQLNAMNEEL NKKEAALSAL ALEFDKMKEI 240
SARGWWELIE QFNANEVMKF EAWLNSTAFN MDSRLKRLKN EASSSTHSL
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