PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01824g00023.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family TALE
Protein Properties Length: 587aa    MW: 64759.2 Da    PI: 7.3517
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01824g00023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.91.9e-093814132254
                               SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                  Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                               ++yp+ +++  LA+++gLt +qV++WF N R +
  Peinf101Scf01824g00023.1 381 HPYPTDSDKHMLATQTGLTRNQVSNWFINARVR 413
                               89*****************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF075269.1E-36150297IPR006563POX domain
SMARTSM005741.3E-30163298IPR006563POX domain
PROSITE profilePS5007111.823354417IPR001356Homeobox domain
CDDcd000862.76E-11357418No hitNo description
SMARTSM003896.2E-9357421IPR001356Homeobox domain
SuperFamilySSF466894.71E-17359423IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.1E-28360421IPR009057Homeodomain-like
PfamPF059205.5E-18374413IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MSDQTSEFHV AQHSRRERLR INEIFQPYQH TTNISYDPSL VLSPEMLNFA TSTESMLVPM  60
SHSAVSNHVN RTSDGVTQNF GTWRSVNLQQ QASCNWKNVA NYNSSGGIGS NLSSPLFVGG  120
EGNLSGSLNL NNASTIDVKP INYFGYQDMQ PAQQLLDELC NLTAGSNAIK SCNFSKNVRD  180
GVRVSCDVNA AESSSGAVGD SGGSSSSFYS SKVQKQECGG LRSSTESNVR PDYLQKKAKL  240
IYMQDEICKR YKQYHQQMQM VVSSFETVAG LSGATPYISQ ALKTVSQHFR SLRNAISDHL  300
KDIRQALGED LPSPAATGMS RGDGTSSRSN FVEQMLDKQK AAGGAGVAFI ESQQHVWRPQ  360
RGLPERAVAI LRAWLFDHFL HPYPTDSDKH MLATQTGLTR NQVSNWFINA RVRVWKPMVE  420
EIHMLESKVV GETGSSVRKS DHGNLVSEQS NHVINDGLHR SNISISNFGG QHFNGVVNNM  480
SGGMLEKQDN CLGIGPSERL DNEDLWKNQE KRSKLECHIP ATIGDGSFMG FVPYQRNGLE  540
VGGIGAVSLT LGLRQSAEAA QQQQQMQLHE HRLRQQFGGQ MIHDLVD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A2e-16363420158Homeobox protein Meis1
4xrs_B2e-16363420158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009615825.10.0PREDICTED: BEL1-like homeodomain protein 1
TrEMBLA0A1S4C0W70.0A0A1S4C0W7_TOBAC; uncharacterized protein LOC107813887
STRINGXP_009615825.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87202227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.13e-76BEL1-like homeodomain 8