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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Peinf101Scf01648g06022.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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| Family |
C2H2 |
| Protein Properties |
Length: 316aa MW: 35426.9 Da PI: 8.0971 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf01648g06022.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 16.4 | 2.6e-05 | 152 | 171 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++C+ C k+F+r nL+ H+
Peinf101Scf01648g06022.1 152 FSCHLCFKTFNRYNNLQMHM 171
89*****************9 PP
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| 2 | zf-C2H2 | 15.8 | 4e-05 | 236 | 258 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C +Cgk+F k + ++H +++
Peinf101Scf01648g06022.1 236 FMCRKCGKPFAVKGDWRTHEKNC 258
89*****************9987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MTEPYYNFFT GWFNFIPHHQ QYLSSSSSNF SPPLKEALPL LNNLTLVKEE EYEFAIYKGK 60
YSSCESTAAF SSSTTEEDNE NNVSVSLHIG LPSPSSDLTS SKVSFSSCGG VIEDSGGNKE 120
FDVLSGCPLS GLHKGQYWIP TPSQILTGPT QFSCHLCFKT FNRYNNLQMH MWGHGSQYRK 180
GPESLRGTQP SAMLKLPCYC CAPGCKHNID HPRARPLKDF RTLQTHYKRK HGVKPFMCRK 240
CGKPFAVKGD WRTHEKNCGK IWYCICGSDF KHKRSLKDHI KSFGRGHGAV GVPNLDELED 300
ESTSDIEQDI GSSSPV
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975513 | 1e-141 | HG975513.1 Solanum lycopersicum chromosome ch01, complete genome. |
