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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Peinf101Scf01175g02010.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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| Family |
NAC |
| Protein Properties |
Length: 347aa MW: 38827.6 Da PI: 8.5491 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf01175g02010.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 172.4 | 1.4e-53 | 16 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWka
Peinf101Scf01175g02010.1 16 LPPGFRFHPTDEELVVHYLKKKAASIPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKA 99
79****************************.88***************988899******************************* PP
NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
tg+dk+vl++ ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl
Peinf101Scf01175g02010.1 100 TGTDKPVLTAgGTQKVGVKKALVFYGGKPPKGVKTNWIMHEYRL 143
********9977788***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MESTDSSTGS HQQPQLPPGF RFHPTDEELV VHYLKKKAAS IPLPVAIIAE VDLYKFDPWE 60
LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVLTAG GTQKVGVKKA 120
LVFYGGKPPK GVKTNWIMHE YRLADNKTNN KPPGCDVANK KSLRLDDWVL CRIYKKHNTQ 180
RPIDHERDDL NDMMGSSIPP CNLPNTMSMS PFGHQPKIPG LKSCNYGTLL ESDHQNLYDG 240
MISNTSDSVN KGSISQFSSK RPLAGLYWND QEATANDNSQ STKRFLGENM DDGLNMNVRT 300
DEQNGSIASL LSQLPQTPSI HQQQVLGSIN DGVFRQPYQV SGMNWYS
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-74 | 13 | 179 | 14 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-74 | 13 | 179 | 14 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-74 | 13 | 179 | 14 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-74 | 13 | 179 | 14 | 168 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-74 | 1 | 179 | 9 | 171 | NAC domain-containing protein 19 |
| 3swm_B | 3e-74 | 1 | 179 | 9 | 171 | NAC domain-containing protein 19 |
| 3swm_C | 3e-74 | 1 | 179 | 9 | 171 | NAC domain-containing protein 19 |
| 3swm_D | 3e-74 | 1 | 179 | 9 | 171 | NAC domain-containing protein 19 |
| 3swp_A | 3e-74 | 1 | 179 | 9 | 171 | NAC domain-containing protein 19 |
| 3swp_B | 3e-74 | 1 | 179 | 9 | 171 | NAC domain-containing protein 19 |
| 3swp_C | 3e-74 | 1 | 179 | 9 | 171 | NAC domain-containing protein 19 |
| 3swp_D | 3e-74 | 1 | 179 | 9 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 2e-74 | 13 | 179 | 14 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 2e-74 | 13 | 179 | 14 | 168 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor of the NAC family (Probable). Together with NAC018/NARS2, regulates embryogenesis by regulating the development and degeneration of ovule integuments, a process required for intertissue communication between the embryo and the maternal integument (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By Jasmonic acid (JA). {ECO:0000269|PubMed:16805732}. |
