PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00536g18020.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family AP2
Protein Properties Length: 399aa    MW: 45972.6 Da    PI: 10.116
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00536g18020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.12.2e-1376135155
                       AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                               s+++GV++++++gr++A+++d  s+n    k+ k+++lg ++ +e Aa+ ++ a+ k++g
  Peinf101Scf00536g18020.1  76 SRFRGVSRHRWTGRYEAHLWDkASWNVtqkKKgKQVYLGAYDEEESAARSYDSAAIKYWG 135
                               789******************877754655447*************************98 PP
2AP240.28.7e-13178226155
                       AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                               s+y+GV +++ +grW+A+I   +   g +k+ +lg   t eeAa+a++ a+ +++g
  Peinf101Scf00536g18020.1 178 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLG---TQEEAARAYDVAAIEYRG 226
                               89****99**********99966...3.5****77...89**************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.25E-1976145No hitNo description
SuperFamilySSF541713.47E-1576145IPR016177DNA-binding domain
PfamPF008471.6E-1076135IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-1477144IPR001471AP2/ERF domain
PROSITE profilePS5103218.97977143IPR001471AP2/ERF domain
SMARTSM003803.2E-2377149IPR001471AP2/ERF domain
PRINTSPR003678.2E-67889IPR001471AP2/ERF domain
CDDcd000182.01E-21178236No hitNo description
SuperFamilySSF541719.15E-14178236IPR016177DNA-binding domain
PfamPF008471.8E-8178226IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.8E-14179235IPR001471AP2/ERF domain
SMARTSM003801.5E-20179240IPR001471AP2/ERF domain
PROSITE profilePS5103214.289179234IPR001471AP2/ERF domain
PRINTSPR003678.2E-6216236IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MDLNTFVKTE MVSPKRRSMC MVDYGIPLNK CVKRRRRSPP AALVMNNHNN GQQQQQLDSP  60
KADQKIVQTP TVKRSSRFRG VSRHRWTGRY EAHLWDKASW NVTQKKKGKQ VYLGAYDEEE  120
SAARSYDSAA IKYWGTSTFT NFPISDYEIE IEIMQNMTKE EYLATLRRKS SGFARGASKY  180
RGVARHHHNG RWEARIGRVF GNKYLYLGTQ EEAARAYDVA AIEYRGTNAM TNFDLSTYVR  240
WPKPNANSQM SFQDLKTENK YIQSNANDLI NSINDSSFSF NPTYFTTNNG NMSVIVPQSQ  300
EPIERKMPLS PRKKSSSPTA LSLLFRSSMF RELVEKNSST AAEETKEDNM KNKTQSRTEN  360
EFMFYTNDKL PRLESLENGT TYSSALCDRA GQSFWNRMS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11436KRRSMCMVDYGIPLNKCVKRRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019248724.10.0PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700
TrEMBLA0A1U8H7K50.0A0A1U8H7K5_CAPAN; AP2-like ethylene-responsive transcription factor At1g79700 isoform X2
TrEMBLA0A2G3DCR20.0A0A2G3DCR2_CAPCH; AP2-like ethylene-responsive transcription factor BBM2
STRINGSolyc06g066390.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34402145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.34e-85AP2 family protein