PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00359g09013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | TCP | ||||||||
Protein Properties | Length: 333aa MW: 37247.8 Da PI: 10.1315 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 135.1 | 6e-42 | 76 | 206 | 3 | 130 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsss 87 kkdrhski T++g RdRRvRls+ +a++fFdLqd+LGfdk+skt++WL++++k ai el+ + ++s++e+ s++s ss+ Peinf101Scf00359g09013.1 76 MKKDRHSKILTSQGHRDRRVRLSIGVARKFFDLQDMLGFDKPSKTLDWLFTKSKLAIEELVTQMNTSHEES------SKKSPSSI 154 69************************************************************966666333......22222233 PP TCP 88 g.........kaaksaakskksqksaasalnlakesrakarararertrekm 130 + ++++ a++k+ + ++ + la+esrakarararert +k Peinf101Scf00359g09013.1 155 SecddlvmttTKETKRAQQKQVKLQEDPLHVLARESRAKARARARERTIKKI 206 3344555665444444444444445555699999**************8886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 4.4E-39 | 76 | 206 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 34.535 | 77 | 135 | IPR017887 | Transcription factor TCP subgroup |
PROSITE profile | PS51370 | 10.869 | 188 | 205 | IPR017888 | CYC/TB1, R domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence Send to blast |
MFPSGNSNVN PILHYSSPSF HHTTNSSFLG LNGNQILLQQ HQDQLSSHYL ASNADLIGAN 60 NQNVCDPLSR GKKLPMKKDR HSKILTSQGH RDRRVRLSIG VARKFFDLQD MLGFDKPSKT 120 LDWLFTKSKL AIEELVTQMN TSHEESSKKS PSSISECDDL VMTTTKETKR AQQKQVKLQE 180 DPLHVLARES RAKARARARE RTIKKIWSQI EAHDNGSGCK TKSNKEHKKM EELNSENNQA 240 SIAASKQMIH SSVFVPSRIK PSSTLGFNSN LSGQKEAMSN YNGYSSNTTQ YWDVSRAIMS 300 SSLSAAMTTI STSSQVLQGC DQKAWESYHG SQI |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00215 | DAP | Transfer from AT1G67260 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JQ400105 | 0.0 | JQ400105.1 Petunia x hybrida putative transcription factor (TCP2) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009793865.1 | 1e-123 | PREDICTED: transcription factor CYCLOIDEA | ||||
Refseq | XP_009793866.1 | 1e-123 | PREDICTED: transcription factor CYCLOIDEA | ||||
Refseq | XP_009793867.1 | 1e-123 | PREDICTED: transcription factor CYCLOIDEA | ||||
Refseq | XP_009793868.1 | 1e-123 | PREDICTED: transcription factor CYCLOIDEA | ||||
Refseq | XP_016445375.1 | 1e-123 | PREDICTED: transcription factor CYCLOIDEA-like | ||||
Refseq | XP_016445376.1 | 1e-123 | PREDICTED: transcription factor CYCLOIDEA-like | ||||
TrEMBL | G0ZGI7 | 0.0 | G0ZGI7_PETHY; Putative transcription factor | ||||
STRING | XP_009793865.1 | 1e-122 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4333 | 22 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67260.2 | 2e-27 | TCP family protein |