PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00278g02016.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bZIP
Protein Properties Length: 410aa    MW: 43704.5 Da    PI: 6.6825
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00278g02016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_165.11.2e-20267329163
                               XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                               e+e kre+rkq+NRe+ArrsR+RK+ae eeL+ +v++L+aeN +Lk+ +++l ++++klk e+
  Peinf101Scf00278g02016.1 267 EREMKREKRKQSNRESARRSRLRKQAEAEELAIRVQSLTAENLTLKSDINKLMENSEKLKLEN 329
                               799*********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.4E-36192IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165966.2E-20130247No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-15260326No hitNo description
SMARTSM003385.6E-17267331IPR004827Basic-leucine zipper domain
PfamPF001702.6E-19267329IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.403269332IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.0E-9270326No hitNo description
CDDcd147023.85E-19272320No hitNo description
PROSITE patternPS000360274289IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MGNSEDGKSS KPEKSSSPAP DQSSLHLYPD WAAMQAYYGP RVAVPAYFNS AVAPGHTPHP  60
YMWGPQPMIP PYGAPYAAIY AHGGVYAHPG VPIGSHPPGQ GMTTSPAVSQ AMDGASLSLD  120
TSAKSSGNSD RGLTTKLKEF EGLSMSLGNG CADSVEGGTD HGHSQSEETE GSTDGSDTNA  180
AGVCERTADC KSHSRRCQPT GKGNDDSEKA IVAVSPGKVA EKVMGTVLSP GTTTLEMRNP  240
VSHVKTSPTN VSQLSPTLPN ESWIQNEREM KREKRKQSNR ESARRSRLRK QAEAEELAIR  300
VQSLTAENLT LKSDINKLME NSEKLKLENA ALMERMKNGE LGKREEVSLG KIDDKRLQPI  360
GTADLLARVN NSGSLDTTNE DGEVYAKNSS GAKLRQLLDS SPRTDAVAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1283289RRSRLRK
2283290RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTrans-activator of a beta-glucuronidase (GUS) reporter gene. Binds to a G-box-related element, (5'-GCAACGTGGC-3'). Also binds to the HEX-motif of wheat histone H3 promoter.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankX603630.0X60363.1 Tobacco mRNA for truncated TAF-1 protein, binding to G-box motif.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016538167.10.0PREDICTED: transcriptional activator TAF-1
SwissprotQ991421e-143TAF1_TOBAC; Transcriptional activator TAF-1 (Fragment)
TrEMBLA0A1U8DT230.0A0A1U8DT23_CAPAN; Common plant regulatory factor 1
TrEMBLA0A2G2YY320.0A0A2G2YY32_CAPAN; transcriptional activator TAF-1
STRINGXP_009765847.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31132447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-96G-box binding factor 3
Publications ? help Back to Top
  1. Oeda K,Salinas J,Chua NH
    A tobacco bZip transcription activator (TAF-1) binds to a G-box-like motif conserved in plant genes.
    EMBO J., 1991. 10(7): p. 1793-802
    [PMID:2050116]