PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00252g00226.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

HSF

Protein Properties

Length: 314aa MW: 35813.2 Da PI: 5.1106

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00252g00226.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	97.5	1.3e-30	25	115	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksF 86 Fl+klye++ed+e+++li+w++++ +fv++d++ f +vLp+yFkhsn++SF+ QLn YgF+k+++ + e+++++F Peaxi162Scf00252g00226.1 25 FLSKLYEMVEDPETDDLIHWTTTKAAFVITDPNMFCVQVLPNYFKHSNLSSFIYQLNNYGFRKISSYR---------SEYENPWF 100 9*******************99**************************************99.........57** PP XXXXXXXXXXXXXXX CS HSF_DNA-bind 87 kkgkkellekikrkk 101 + gkk+ l++ik + Peaxi162Scf00252g00226.1 101 QGGKKHWLKNIKSRI 115 **********986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.10	6.0E-31	18	109	IPR011991	Winged helix-turn-helix DNA-binding domain
SuperFamily	SSF46785	3.54E-30	21	113	IPR011991	Winged helix-turn-helix DNA-binding domain
SMART	SM00415	2.3E-40	21	114	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PRINTS	PR00056	4.8E-17	25	48	IPR000232	Heat shock factor (HSF)-type, DNA-binding
Pfam	PF00447	2.2E-27	25	113	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PRINTS	PR00056	4.8E-17	63	75	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PRINTS	PR00056	4.8E-17	76	88	IPR000232	Heat shock factor (HSF)-type, DNA-binding

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MNQENGGGIV RRRASRLRGV APPPFLSKLY EMVEDPETDD LIHWTTTKAA FVITDPNMFC 60 VQVLPNYFKH SNLSSFIYQL NNYGFRKISS YRSEYENPWF QGGKKHWLKN IKSRIQLSKA 120 DKAQRSSGSP SVDLLKDNLE EELENLKSDH ITLKIELQEL KEKQEKMRIQ FPTMLGLKLF 180 LEDFKVRGES SSNDTRKKPR LEESPDGVVA TCQDGIGQTS NSAGGSVSSN EEQKEEATAR 240 NEKNREFWKK LFDDDSESEN GGSEAQKELN RSKALVEIEE MVENKIAMEG EALIAKVATS 300 GLQDEMETYL QLWT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5d5u_B	3e-21	23	115	27	130	Heat shock factor protein 1
5d5v_B	3e-21	23	115	27	130	Heat shock factor protein 1
5d5v_D	3e-21	23	115	27	130	Heat shock factor protein 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015169233.1	1e-154	PREDICTED: heat stress transcription factor A-7a-like
TrEMBL	M1CRG3	1e-152	M1CRG3_SOLTU; Uncharacterized protein
STRING	XP_009620920.1	1e-156	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12970	15	18

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	2e-34	heat shock transcription factor A2