PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00221g00512.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 27715.6 Da PI: 9.6724 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.7 | 0.00012 | 216 | 241 | 4 | 29 |
HHHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 4 ahnerErrRRdriNsafeeLrellPk 29 h + Err +++N +f+ Lr+llP+ Peaxi162Scf00221g00512.1 216 HHMISERRMHEKLNGSFQVLRSLLPP 241 68899********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence Send to blast |
QKLNYLHAQN ILLNHINFHH FVLANASSFC SSLTFLDRIY KDENNVAQRL FEEYRHLWLI 60 MDNGRIPELA FKSKLPYMEL LLIFNHMPPI QCIFNSTGKL GSRNGDDEHF SKHFSSQAAA 120 PAPTPAPGVT RGLPHQLLSI DQNRPSSSSS LSIDSPEYFS SIGETEDAAL TRAYLAVRTR 180 PLNMLKRSII LFRNLNMMTR QEQGQANRFP SSTQVHHMIS ERRMHEKLNG SFQVLRSLLP 240 PGT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027774144.1 | 2e-38 | putative transcription factor bHLH041 isoform X2 | ||||
TrEMBL | A0A3Q7H7U5 | 1e-35 | A0A3Q7H7U5_SOLLC; Uncharacterized protein | ||||
STRING | Solyc07g039570.2.1 | 2e-36 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4567 | 23 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56960.1 | 9e-11 | bHLH family protein |