PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00176g00164.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

C2H2

Protein Properties

Length: 361aa MW: 39985.3 Da PI: 7.0243

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00176g00164.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00086	153	175	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Peaxi162Scf00176g00164.1 153 YECKTCNRTFPSFQALGGHRASH 175 99**********99999998887 PP
2	zf-C2H2	13	0.00031	238	260	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cg F++ L H+r+H Peaxi162Scf00176g00164.1 238 HACSYCGAEFNSGQALGGHMRRH 260 67********************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13912	3.4E-13	152	177	IPR007087	Zinc finger, C2H2
SuperFamily	SSF57667	2.88E-8	152	175	No hit	No description
SMART	SM00355	0.052	153	175	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	11.843	153	180	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	155	175	IPR007087	Zinc finger, C2H2
SuperFamily	SSF57667	2.88E-8	233	260	No hit	No description
Pfam	PF13912	9.2E-12	238	262	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	10.18	238	265	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.021	238	260	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	240	260	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence Send to blast
MEAPHEEVVG GSNNELSHIV KGKRTKRLRP QSPIPFTITS HSSTRGDGHD QDGVVLHGEV 60 TIIDNNNNSS PPPATSAENF PDIPTEEEEE TAKCLILLSQ GSHHQRFMES SPDKLFNLFN 120 DDMGLSQSKF NSKKYVETTN VGNGGGKVGT YVYECKTCNR TFPSFQALGG HRASHKKPKP 180 LTLEPKKPFF YFSDQDEPSP TTTYKNNNNK LSPLSPLSFQ FNNINMESPT NKSSPRIHAC 240 SYCGAEFNSG QALGGHMRRH RGGANTNLCL SPLSTPAISI EDSSYNNLKK PRNVGLSLDL 300 NLPAPEDQSQ SRNLQHPPKF PVLALEQQDD QGEKQKQQQQ REEQSTALVL STTPQLIDCH 360 Y

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence Send to blast

MEAPHEEVVG GSNNELSHIV KGKRTKRLRP QSPIPFTITS HSSTRGDGHD QDGVVLHGEV  60
TIIDNNNNSS PPPATSAENF PDIPTEEEEE TAKCLILLSQ GSHHQRFMES SPDKLFNLFN  120
DDMGLSQSKF NSKKYVETTN VGNGGGKVGT YVYECKTCNR TFPSFQALGG HRASHKKPKP  180
LTLEPKKPFF YFSDQDEPSP TTTYKNNNNK LSPLSPLSFQ FNNINMESPT NKSSPRIHAC  240
SYCGAEFNSG QALGGHMRRH RGGANTNLCL SPLSTPAISI EDSSYNNLKK PRNVGLSLDL  300
NLPAPEDQSQ SRNLQHPPKF PVLALEQQDD QGEKQKQQQQ REEQSTALVL STTPQLIDCH  360
Y

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009609087.1	1e-176	PREDICTED: zinc finger protein ZAT5
TrEMBL	A0A314KSU5	1e-174	A0A314KSU5_NICAT; Zinc finger protein zat5
STRING	XP_009609087.1	1e-175	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4015	23	43

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	3e-41	C2H2 family protein