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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.9KG518500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 233aa MW: 25708.1 Da PI: 11.1772 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9KG518500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.6 | 7.3e-10 | 166 | 189 | 3 | 26 |
XXCHHHCHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKka 26
elk err q+NRe+ArrsR+RK++
Pavir.9KG518500.1.p 166 ELKSERRNQSNRESARRSRLRKQE 189
79*********************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MCSLRTRNGL RRCRPATPPV GSLTPGTPRR YRRCPRFGFV QNVPYTAGEP VAAPEGKSKR 60 KSSGAPSVGN ASRSSDGRSE ETSDKRYASV EHKLLPSAKR RMSTGANCLT TVTFQASHLR 120 LQQCKRRSAG KLLVSTTEMA AISNARPNLN IGLDLWSNSL VKDDGELKSE RRNQSNRESA 180 RRSRLRKQEL DQKGEMEQAE EPSVVTTLSM HIEKAKVHHG KSDQHRCKKV GA*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 180 | 186 | RRSRLRK |
2 | 180 | 187 | RRSRLRKQ |