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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.6NG228200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 272aa MW: 29229.7 Da PI: 9.0255 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.6NG228200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 39.9 | 1e-12 | 87 | 135 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
+y+GV+ ++ grW+Ae r + r+++g+f t+eeA++a++ + ++++
Pavir.6NG228200.1.p 87 RYRGVY-ERQPGRWAAEFRSH---RLKVRHWVGTFATEEEAKAAYDPFERQFH 135
7****8.777*******5553...245*******************8887766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MEARRIRIFF SDPDATDSDS GYDPTSDVCA PTKSAGKTEL VILQCNSRTN TRAKMNPAGC 60 GRPQAIGSLA LAAAGSRAVG SAPTARRYRG VYERQPGRWA AEFRSHRLKV RHWVGTFATE 120 EEAKAAYDPF ERQFHSSPRC GPPPSSSKRG ANAGGVRRAS NPPPDEKRQI VLALTTAATT 180 RMLPPSSAGA TAASVCVSSS TSASPPPPPL FRDARRRDDV PRRLHSIWAD EPADEDIVGL 240 ADLAHLPLPR FSDVSMDFDP ADLSLFDNGF L*
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