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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.3KG447600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 179aa MW: 18953.9 Da PI: 12.3853 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.3KG447600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 27.3 | 9.2e-09 | 142 | 172 | 1 | 35 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgk 35
s+y+GVr+++ +g+W+A+Ir p + r +l++
Pavir.3KG447600.1.p 142 SKYHGVRRRP-WGKWAAQIRNP-----HraVRKWLET 172
89********.**********6.....3368888765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 179 aa
Download sequence Send
to blast |
MNLVKLIFAC QRAGLVAVPI SPPDPSNLGT PAARRHLLRT RGERTARGSR RSCGGRGSRA 60 GARLPAAEVV PPAVFAPAPA LAVACAGCGA DSGQVRHYAG RSELLAAAGI GSSSVNKDGG 120 ECSASHVATG GVGKRRRRMR MSKYHGVRRR PWGKWAAQIR NPHRAVRKWL ETAPRLRR*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 133 | 149 | KRRRRMRMSKYHGVRRR |