 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.I02315.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
Trihelix |
| Protein Properties |
Length: 362aa MW: 39665.1 Da PI: 7.39 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.I02315.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 60.9 | 3.2e-19 | 39 | 108 | 2 | 71 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
Wt e+++Liea+r+++e+ g + ++W++v +++++ g++rs +qC+++w+nl ++ykk+++ e +
Pahal.I02315.1 39 WTLPETMLLIEAKRKVHEERHPGDQVLARWRWVEDYCWRAGCRRSHNQCNDRWDNLMRDYKKVRAYEVAG 108
****************************************************************988776 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MEGGSRALLG QTGDEQSRSV AMAGAGALTV ARDYRRGNWT LPETMLLIEA KRKVHEERHP 60
GDQVLARWRW VEDYCWRAGC RRSHNQCNDR WDNLMRDYKK VRAYEVAGAG AGRAPSYWAM 120
GRAERKEKGL PSNLLREIYD AMGEVIERRM SLGGCGGGSG GGAGGTFLGA SSGLLDVPMQ 180
ASPLAQFLPR SLPLEQETRH HGYRVAHFSP ESPDRKRRRP SLDDLRPGIG SSTPPAPGTH 240
VHRQEQGHRH REDDDDHGRD GESSDSERSD EEEEEEVLSG AIGRCAAILS EALESREAAE 300
ERRHREVMAV EERRGRALQA RREAGQQCVA ELAAAVNQLA GSMLALAAAK HKDKGGAAPP 360
K*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT083602 | 1e-158 | BT083602.1 Zea mays full-length cDNA clone ZM_BFb0018E14 mRNA, complete cds. |
