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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.F03023.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 279aa MW: 29629.9 Da PI: 7.8459 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.F03023.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 35.7 | 2.2e-11 | 88 | 135 | 3 | 54 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
y+G + ++ grW+Ae r + r++lg+f t eeA++a++a+ ++++
Pahal.F03023.1 88 YRGAY-ERQPGRWAAEFRSH---RLKVRHWLGTFATQEEAKAAYDAFERRFH 135
67765.7779******5553...245**********************9988 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MDPRRIRVFF SDPDATDSDS GDSDTCAATK PAGKTEIIIL QCNSSTNTRA KMNPAGCGRP 60 QAIGSSAPAA AGNIRNRAVG SAPTTRRYRG AYERQPGRWA AEFRSHRLKV RHWLGTFATQ 120 EEAKAAYDAF ERRFHSSPRC GLPASSSERG ANAGGVRRAS HSPPDDEKRQ IVLALTTAAT 180 TRMLPPSSAG AMAASVSVPS APCISSSTSA SSPPTLFRDA RRCDDDAPRS LHSIWADEPG 240 DGDLVGLADL AHLPLPQFSD PSMDFDPADL SLFDNGFL*
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