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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.B01974.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 266aa MW: 27964.8 Da PI: 5.6698 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.B01974.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 50.6 | 4.7e-16 | 107 | 156 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr ++ +g+++AeIrd + k +r++lg+f+++e Aa a+++a+ + +g
Pahal.B01974.1 107 FIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDSPEAAALAYDQAAFSVRG 156
57******.**********32..2.24**********************99887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MEQYASYMYS SSYPDHASSC GGGGGVTGAA LDAGGDDMQR LLNALMLDMA AESESFSDDM 60 EAASSDSSSS ACSSAANDSQ QQQRPQPDGH RTCGEKKSSA LERPATFIGV RKRPWGKFAA 120 EIRDSTRKGA RVWLGTFDSP EAAALAYDQA AFSVRGAAAV LNFPVERVQD SLRALALSSS 180 SASSAAAAAA GSPVLALKSR HSIRKRSPNK NKNLPHQQQR PQQQASAAAA PPQPAAFPGS 240 VVELEDLGAD YLDELLRVSS ELDHW*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727683 | 8e-71 | KJ727683.1 Zea mays clone pUT5611 AP2-EREBP transcription factor (EREB59) gene, partial cds. |