|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.A02367.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
Family |
ERF |
Protein Properties |
Length: 296aa MW: 31462.4 Da PI: 8.5246 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.A02367.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.9 | 2.1e-17 | 42 | 92 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +gr++AeIrdp + r +lg+f taeeAa a++ a+++++g+
Pahal.A02367.1 42 RYRGVRRRP-WGRFAAEIRDPM----SkERRWLGTFNTAEEAACAYDIAARAMRGN 92
69*******.**********84....35999**********************995 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MEGAHLYAHT HGHHHHRSKR PTPPGVMDVD HVDGDASPKG ARYRGVRRRP WGRFAAEIRD 60 PMSKERRWLG TFNTAEEAAC AYDIAARAMR GNKARTNFPV HATAAAYWAW GAPHAAAGAG 120 PLDPILVHNL LMSSSHHGCR LLHHAGHGHP SPARPPTPAP APAPPPPASA SRARAAPSET 180 PSPAVASPPA APPGDMDVWG RVLRSGPPDA GLLQDALHGF YPGMLPRMEL RGADAVTEEQ 240 DRHEALAVAS PCAGIDADED GLMPQGLLED MIQYRAFLDV VAAPPAATRR GRRQG*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | EU954877 | 1e-110 | EU954877.1 Zea mays clone 1489895 AP2 domain containing protein mRNA, complete cds. |