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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PSME_00051715-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
NAC |
| Protein Properties |
Length: 303aa MW: 34807.9 Da PI: 5.0159 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00051715-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 134.4 | 7.9e-42 | 24 | 149 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
pGfrF Pt+eel+++yLkk ++g++ l+++++i+++d+y+++P +Lp ++ +e++w+fF++r +++ +r+nr+t sgyWkatg+d++v
PSME_00051715-RA 24 LPGFRFYPTEEELLDFYLKKTIHGRHqLNFDRIIPTLDLYRYDPCELPGLANVGERQWFFFVPRYHTK--CSRPNRMTVSGYWKATGSDRAVR 114
59*********************9996777778***************8888899********98765..68********************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
++ + +glkktLvfykg++++g+kt+W+m+eyrl
PSME_00051715-RA 115 NELLQCIGLKKTLVFYKGKHSSGQKTEWIMNEYRL 149
*99999***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 303 aa
Download sequence Send
to blast |
MAAILAETYN TGDVLQGQRE LMSLPGFRFY PTEEELLDFY LKKTIHGRHQ LNFDRIIPTL 60
DLYRYDPCEL PGLANVGERQ WFFFVPRYHT KCSRPNRMTV SGYWKATGSD RAVRNELLQC 120
IGLKKTLVFY KGKHSSGQKT EWIMNEYRLP DMISSAPKKK MDLVLCRIYR KAVTQKSMEQ 180
LVKHDDIERE KPVVTEMWIE QGFADEDDKE EPVISGDEGK SDSILDTVIC RSNPLTDANV 240
FPLPLGIGET KDEASIFDDL IPIICCEEIM DLKTPQTCYP PQLSVDYVFD QPMGRPCSIL 300
STP
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-38 | 25 | 171 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-38 | 25 | 171 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-38 | 25 | 171 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-38 | 25 | 171 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-38 | 25 | 171 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 2e-38 | 25 | 171 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 2e-38 | 25 | 171 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 2e-38 | 25 | 171 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 2e-38 | 25 | 171 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 2e-38 | 25 | 171 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 2e-38 | 25 | 171 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 2e-38 | 25 | 171 | 22 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 2e-38 | 25 | 171 | 19 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 2e-38 | 25 | 171 | 19 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
