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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
PSME_00040791-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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| Family |
NAC |
| Protein Properties |
Length: 297aa MW: 33505.5 Da PI: 8.5849 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00040791-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 118.5 | 6.5e-37 | 1 | 96 | 36 | 128 |
NAM 36 evdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmhe 125
e+d+yk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ ++++vg+kk Lvfy gr pkg kt+W+mhe
PSME_00040791-RA 1 EIDLYKFDPWELPGKATFGEQEWYFFSPRDRKYPNGARSNRAATSGYWKATGTDKPILTStsgGTQKVGVKKALVFYGGRPPKGIKTNWIMHE 93
689**********8888999**************************************998888899************************** PP
NAM 126 yrl 128
yrl
PSME_00040791-RA 94 YRL 96
*98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 297 aa
Download sequence Send
to blast |
EIDLYKFDPW ELPGKATFGE QEWYFFSPRD RKYPNGARSN RAATSGYWKA TGTDKPILTS 60
TSGGTQKVGV KKALVFYGGR PPKGIKTNWI MHEYRLADSG ARPSSFPNKK GSLRLDDWVL 120
CLIYKKNDEV MTSLPNIEQQ NKLQLPKLGP FSGLLETDDP FIEGLLNYEA MDGNGNISRL 180
PHQVHSSDLS HNNFSNSNDN NSDCQFEVVP KQEALAVDNE NKFNSLKRTL SLAAFGDEEI 240
HSAKRFNVMQ NNYSYNVNNN SRPSDHQNAL RREEQGKMAI YRKALNGVTL GLSLSEM
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-55 | 1 | 127 | 51 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-55 | 1 | 127 | 51 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-55 | 1 | 127 | 51 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-55 | 1 | 127 | 51 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-55 | 1 | 127 | 54 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 1e-55 | 1 | 127 | 54 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 1e-55 | 1 | 127 | 54 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 1e-55 | 1 | 127 | 54 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 1e-55 | 1 | 127 | 54 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 1e-55 | 1 | 127 | 54 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 1e-55 | 1 | 127 | 54 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 1e-55 | 1 | 127 | 54 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 1e-55 | 1 | 127 | 51 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 1e-55 | 1 | 127 | 51 | 166 | NAC domain-containing protein 19 |
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