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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00025528-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 384aa MW: 43660.4 Da PI: 6.9092 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00025528-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 145.1 | 3.9e-45 | 32 | 157 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevls 94
pGfrFhPt++elv +yLk+ v+gk +++ ++i+ +d+y+++PwdLp+ + +e+e++fF++rd+++++ r+nr t sgyWkatg+d+ v +
PSME_00025528-RA 32 PGFRFHPTEQELVGFYLKRMVQGKLHNF-NFIRMLDLYRYDPWDLPSFACLGERELFFFVPRDERSQNnRGRPNRLTPSGYWKATGSDRFVRE 123
9***********************9888.99***************65556899********998886377********************** PP
NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
+g+ +glkktLvfy+grap+g+ktdW+m+eyrl
PSME_00025528-RA 124 DNGKCIGLKKTLVFYRGRAPRGQKTDWIMNEYRL 157
********************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 384 aa
Download sequence Send
to blast |
FSVQPHHRKF IHMKMGMNVG QPGISQTPIE LPGFRFHPTE QELVGFYLKR MVQGKLHNFN 60 FIRMLDLYRY DPWDLPSFAC LGERELFFFV PRDERSQNNR GRPNRLTPSG YWKATGSDRF 120 VREDNGKCIG LKKTLVFYRG RAPRGQKTDW IMNEYRLPDY TDKIKKEVVL CRIYRKATPL 180 KLIEQKAMSQ AEVTSTCEDL DSISQDSQLS PTKIAHNNRA EEAKSICIRD SDSVSCNEIT 240 TEPSSSSQDN VTRSDMTSSL GCAVNSDLNN LMESTVYGGF VEPIFQAFAD ESKKIEGFSS 300 LMAMLNVYPS SGSVENCWDR LLQAKEPESV QIPKLSMDFR NEEAANPNFQ NPWTDLWSPS 360 SIICTPHFCQ NSSLDCLGNG HGGL
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-42 | 32 | 178 | 19 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-42 | 32 | 178 | 19 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-42 | 32 | 178 | 19 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-42 | 32 | 178 | 19 | 167 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-42 | 32 | 178 | 19 | 167 | NAC domain-containing protein 19 |
4dul_B | 2e-42 | 32 | 178 | 19 | 167 | NAC domain-containing protein 19 |
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