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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00017961-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
WOX |
Protein Properties |
Length: 145aa MW: 17200.3 Da PI: 10.4973 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00017961-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 47 | 4.3e-15 | 37 | 94 | 3 | 55 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRake 55
+R+++t+eq+ e+ + + ++ps+++ ++ ++l +++ + V++WFqNr+a e
PSME_00017961-RA 37 SRWNPTNEQIALVEATYSQgIHTPSHDQVDQIVSRLrmygNIERNSVFYWFQNRKASE 94
8*****************99***********************************976 PP
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2 | Wus_type_Homeobox | 86.7 | 2.6e-28 | 35 | 98 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+++RW+Pt+eQi + e+ y++G+ tP+++++ +i ++L+ yG+ie + VfyWFQNrka e q+q
PSME_00017961-RA 35 SSSRWNPTNEQIALVEATYSQGIHTPSHDQVDQIVSRLRMYGNIERNSVFYWFQNRKASEEQRQ 98
689********************************************************99986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 145 aa
Download sequence Send
to blast |
MQLSQSTSTH RFLLKKVQEK DQGSREMAEG QSSTSSSRWN PTNEQIALVE ATYSQGIHTP 60 SHDQVDQIVS RLRMYGNIER NSVFYWFQNR KASEEQRQKR ERMASINHFL QEPSLARKSR 120 KNSKKLYDIC FNLRNKIWNI SFHYN
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in embryonic patterning. Required for apical embryo development after fertilization. Its specific localization to the apical daughter cell of the zygote, while WOX8 is confined to the basal cell, suggests that the asymmetric division of the plant zygote separates determinants of apical and basal cell fates. {ECO:0000269|PubMed:14711878}. |
Publications
? help Back to Top |
- Liang Z,Brown RC,Fletcher JC,Opsahl-Sorteberg HG
Calpain-Mediated Positional Information Directs Cell Wall Orientation to Sustain Plant Stem Cell Activity, Growth and Development. Plant Cell Physiol., 2015. 56(9): p. 1855-66 [PMID:26220906] - Zhu T,Moschou PN,Alvarez JM,Sohlberg JJ,von Arnold S
WUSCHEL-RELATED HOMEOBOX 2 is important for protoderm and suspensor development in the gymnosperm Norway spruce. BMC Plant Biol., 2016. 16: p. 19 [PMID:26786587] - Zhang Z,Tucker E,Hermann M,Laux T
A Molecular Framework for the Embryonic Initiation of Shoot Meristem Stem Cells. Dev. Cell, 2017. 40(3): p. 264-277.e4 [PMID:28171749]
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