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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
PSME_00017726-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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| Family |
WOX |
| Protein Properties |
Length: 134aa MW: 15266.4 Da PI: 10.0395 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00017726-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 44.5 | 2.6e-14 | 13 | 70 | 5 | 57 |
SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 5 ttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+++t+eq+ Le+ + r ps++++ ++A++l +++ ++ ++WFqNr+a ek+
PSME_00017726-RA 13 WNPTNEQIALLEATDSQgIRIPSRDQIDRIASRLrmygNIEGKNLFYWFQNRKAHEKQ 70
9*************9998*************************************996 PP
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| 2 | Wus_type_Homeobox | 85.9 | 4.5e-28 | 10 | 71 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
++ W+Pt+eQi +Le+ ++G+r P++++i ri+++L+ yG+ie+kN fyWFQNrka e+q
PSME_00017726-RA 10 SNSWNPTNEQIALLEATDSQGIRIPSRDQIDRIASRLRMYGNIEGKNLFYWFQNRKAHEKQT 71
678*********************************************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 134 aa
Download sequence Send
to blast |
MAEGQSSHSS NSWNPTNEQI ALLEATDSQG IRIPSRDQID RIASRLRMYG NIEGKNLFYW 60
FQNRKAHEKQ TQKQERMASI NPFQETSLAR KSTKIVRSST ISASIFEIKS RTFHLTITKA 120
SSLLLLQCIC VCCI
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in embryonic patterning. Required for apical embryo development after fertilization. Its specific localization to the apical daughter cell of the zygote, while WOX8 is confined to the basal cell, suggests that the asymmetric division of the plant zygote separates determinants of apical and basal cell fates. {ECO:0000269|PubMed:14711878}. |
| Publications
? help Back to Top |
- Liang Z,Brown RC,Fletcher JC,Opsahl-Sorteberg HG
Calpain-Mediated Positional Information Directs Cell Wall Orientation to Sustain Plant Stem Cell Activity, Growth and Development.
Plant Cell Physiol., 2015. 56(9): p. 1855-66
[PMID:26220906] - Zhu T,Moschou PN,Alvarez JM,Sohlberg JJ,von Arnold S
WUSCHEL-RELATED HOMEOBOX 2 is important for protoderm and suspensor development in the gymnosperm Norway spruce.
BMC Plant Biol., 2016. 16: p. 19
[PMID:26786587] - Zhang Z,Tucker E,Hermann M,Laux T
A Molecular Framework for the Embryonic Initiation of Shoot Meristem Stem Cells.
Dev. Cell, 2017. 40(3): p. 264-277.e4
[PMID:28171749]
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