 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PSME_00004379-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
NAC |
| Protein Properties |
Length: 295aa MW: 33872.6 Da PI: 6.5962 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00004379-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 132.6 | 2.8e-41 | 20 | 147 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
pGfrF Pt+eel+ +yLkk v+ + l+++++i+++d+y+++Pw+Lp +++ +e++w+fF++r + + +g+r+nr t sg+Wkatg+d+ v
PSME_00004379-RA 20 LPGFRFYPTEEELLGFYLKKMVQCVHaLKFDKIIPTLDLYRYDPWELPgLAHDVGERQWFFFVPRVHGK-SGSRPNRLTVSGFWKATGSDRVV 111
69*********************9886888888***************657777999*******99875.69********************* PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + + +glkktLvfykg+a g++tdW+m+ey+l
PSME_00004379-RA 112 RNDQLQCIGLKKTLVFYKGKALGGQRTDWIMNEYKL 147
**99999***************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MAMMEEIHND GDVQRELMVL PGFRFYPTEE ELLGFYLKKM VQCVHALKFD KIIPTLDLYR 60
YDPWELPGLA HDVGERQWFF FVPRVHGKSG SRPNRLTVSG FWKATGSDRV VRNDQLQCIG 120
LKKTLVFYKG KALGGQRTDW IMNEYKLPDL SSSTTKNMVD MVLCRIYRKA VSRKSIEQRA 180
KPNHVQIEDP VLSAGNSFGL NGSFQFSYPI RETGISSLHH QNQNQEGVCS FDLSKTNDQD 240
SLFEYLDETM FCEETMVLKT TQPCKPQHLE LPTSSIDCFF NHDAVPSPWA DNINA
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-41 | 12 | 172 | 10 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-41 | 12 | 172 | 10 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-41 | 12 | 172 | 10 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-41 | 12 | 172 | 10 | 168 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-41 | 12 | 172 | 13 | 171 | NAC domain-containing protein 19 |
| 3swm_B | 1e-41 | 12 | 172 | 13 | 171 | NAC domain-containing protein 19 |
| 3swm_C | 1e-41 | 12 | 172 | 13 | 171 | NAC domain-containing protein 19 |
| 3swm_D | 1e-41 | 12 | 172 | 13 | 171 | NAC domain-containing protein 19 |
| 3swp_A | 1e-41 | 12 | 172 | 13 | 171 | NAC domain-containing protein 19 |
| 3swp_B | 1e-41 | 12 | 172 | 13 | 171 | NAC domain-containing protein 19 |
| 3swp_C | 1e-41 | 12 | 172 | 13 | 171 | NAC domain-containing protein 19 |
| 3swp_D | 1e-41 | 12 | 172 | 13 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 1e-41 | 12 | 172 | 10 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 1e-41 | 12 | 172 | 10 | 168 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
