PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK09653.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 405aa    MW: 44201.9 Da    PI: 9.0999
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK09653.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_167.91.6e-21275337163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                ++elkrerrkq+NRe+ArrsR+RK+ae+e L++kv++L++eN+aLk el++l+++++kl+ e+
  PK09653.1 275 DRELKRERRKQSNRESARRSRLRKQAETEDLARKVESLTSENEALKVELNRLTENSEKLRLEN 337
                689********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.2E-351100IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.6E-20134256No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-17268334No hitNo description
SMARTSM003385.0E-19275339IPR004827Basic-leucine zipper domain
PfamPF001701.6E-19276337IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.38277340IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-10278334No hitNo description
CDDcd147028.03E-21280328No hitNo description
PROSITE patternPS000360282297IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MGNDEEGKSA KFEKTSPPAT PDQTTPTNQA NVHVYPDWAA MQAYYGPRVA LPQYYNSAVA  60
SGHAPHPYLW GPPQPMMPSF GTPYAAIYPH GNVYAHPRVP LGAHGHGVPS SPALGVTPVT  120
VSVEMPTKSS GNSEKELEKK MKGFDSLSMS IGNGHVESRA EEMLSQSTET EGSSDGSDGH  180
TSGANRIRRK RSREETPTTG DEKTEKQVNS VSDKTMGASL SAAGVPAKLV GPIVSPGMTT  240
AFDLRNPTNL SPKTSPSGFN QACTVLPSDS WVQNDRELKR ERRKQSNRES ARRSRLRKQA  300
ETEDLARKVE SLTSENEALK VELNRLTENS EKLRLENTKL VGKLEDTKLG RAEEIVMNKV  360
DKRTQPISTE NLLSRVNNSG SIDRTAETDN GMYEKNSKPG TKLHX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1291297RRSRLRK
2291298RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024019007.10.0common plant regulatory factor 1
RefseqXP_024019008.10.0common plant regulatory factor 1
RefseqXP_024019009.10.0common plant regulatory factor 1
SwissprotQ990891e-128CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A2P5E8F90.0A0A2P5E8F9_TREOI; Basic-leucine zipper transcription factor
STRINGXP_010092905.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-94G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]