PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK07494.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 263aa    MW: 28779.6 Da    PI: 4.8943
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK07494.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_157.62.7e-18128190163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+ lkrerrkq NRe+ArrsR RK+ae eeL ++ ++L  eN aLk+el +lk  ++kl+ e+
  PK07494.1 128 ERLLKRERRKQANRESARRSRMRKQAEYEELVRRWDSLNMENNALKSELGQLKGDSEKLRLEN 190
                788********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-13124187No hitNo description
PfamPF001704.0E-17128190IPR004827Basic-leucine zipper domain
SMARTSM003382.6E-14128192IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.852130193IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-10131186No hitNo description
CDDcd147021.37E-15133179No hitNo description
PROSITE patternPS000360135150IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MEEQGLTKKL KGSDGLPVPV LKELPRLERE LDGQTAGSYG NSDADKTQGN NGAESKQTSD  60
IDRRVLAQVT SSTDWEANET SSNFSDNTVP PMNFIGYVGS SCEKTGNMSD CVASVGAGTS  120
SNGMTMDERL LKRERRKQAN RESARRSRMR KQAEYEELVR RWDSLNMENN ALKSELGQLK  180
GDSEKLRLEN AALMAKLGCA AVDQQGDTVS DKAETNSALL NSSTEKVVEI SNDSNRNENS  240
DNPEAKLHQL LNPSTRTDAV SAR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144151RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024026956.12e-92G-box-binding factor 3
TrEMBLA0A2P5B6A91e-109A0A2P5B6A9_PARAD; Basic-leucine zipper transcription factor
STRINGXP_010105000.11e-90(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15470810
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.17e-25G-box binding factor 3