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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01004791G0030 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 266aa MW: 28867.5 Da PI: 8.22 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01004791G0030 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.4 | 4.2e-19 | 100 | 149 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+ta eAa a+++a+ +l+g
PH01004791G0030 100 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAGEAALAYDQAAYRLRG 149
59******9.**********955...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MAAAIDRPGD LMGALEPFIR DALSPQMQKI QPPPFPPTLP PPFPTGAHGY HYMGQPQAQL 60 SPAQMQYIQA RLRLRRQSGL GPRGQPMKPA AAAPPPAQKL YRGVRQRHWG KWVAEIRLPR 120 NRTRLWLGTF DTAGEAALAY DQAAYRLRGD AARLNFPDNA ASRAPLDAAV DAKLKSICHT 180 VAAASKNSKA TPINAPAVAA SSHCSSEHSG DSAVDDGSET SSASASPLAE MEQLDFNEVP 240 WDEAESFVLK KYPSYEIDWD SLLSSN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP100667 | 0.0 | FP100667.1 Phyllostachys edulis cDNA clone: bphylf027g06, full insert sequence. |