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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01003525G0030 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 321aa MW: 35151.2 Da PI: 9.2238 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01003525G0030 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 48.8 | 1.7e-15 | 172 | 221 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GV+++++ grW A+I +s +k +lg+f t eeAa+a++ a+ k++g
PH01003525G0030 172 YRGVTRHHQHGRWQARIGRVSG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 221
9***************999754...5************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MTNNNNGNNG VTNAAASGWL GFSLSPHMSS SMDDHHHHHH VQQQHHHHGL FFPTVTTAAA 60 AAYGLGGDVV AATNGYYSQL ASMPLKSDGS LCIMEALRRT DQDHHGGYDM EEKAARAYDL 120 AALKYWGPST HINFPLEDYQ EELEEMKNMT RQEYVAHLRR KSSGFSRGAS MYRGVTRHHQ 180 HGRWQARIGR VSGNKDLYLG TFSTQEEAAE AYDIAAIKFR GLNAVTNFDI TRYDVDKIMA 240 SNTLLPGELA RRKKVDALHA ADSAAAALVQ AGSAADGWKV AAEALARRRA QPQPPRRLVR 300 RCLLCAARPG DRGRGGHGPS *
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Functional Description ? help
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Source |
Description |
UniProt | Acts as positive regulator of adventitious (crown) root formation by promoting its initiation. Promotes adventitious root initiation through repression of cytokinin signaling by positively regulating the two-component response regulator RR1. Regulated by the auxin response factor and transcriptional activator ARF23/ARF1. {ECO:0000269|PubMed:21481033}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by auxin. {ECO:0000269|PubMed:21481033}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT088263 | 1e-174 | BT088263.1 Zea mays full-length cDNA clone ZM_BFc0105N21 mRNA, complete cds. |