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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01002733G0270 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 192aa MW: 21113.8 Da PI: 6.5451 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01002733G0270 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.4 | 4e-19 | 51 | 101 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+y+G+r+++ +g+W+AeIrdp+ + r++lg+f tae Aa a+++a+++++g+
PH01002733G0270 51 QYRGIRRRP-WGKWAAEIRDPV----KgVRVWLGTFPTAEAAALAYDRAARRIRGA 101
6********.**********75....44*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0034059 | Biological Process | response to anoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 192 aa
Download sequence Send
to blast |
MCGGAIIQDY IPARRRVSAA DFWPDADDSD PHPHGPATEK APRAKRERKN QYRGIRRRPW 60 GKWAAEIRDP VKGVRVWLGT FPTAEAAALA YDRAARRIRG AKAKVNFPND VPRAASAVLP 120 PPKKEPESAA CSDEVKELSE ELMAYESYMN FLGIPYMEGG DAVAPTTAAE EAPAPAGLWS 180 FEDYYQPSLE L*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 44 | 58 | KRERKNQYRGIRRRP |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP095726 | 0.0 | FP095726.1 Phyllostachys edulis cDNA clone: bphylf030c12, full insert sequence. |
GenBank | FP096664 | 0.0 | FP096664.1 Phyllostachys edulis cDNA clone: bphyem124m12, full insert sequence. |