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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PH01002011G0250 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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| Family |
AP2 |
| Protein Properties |
Length: 375aa MW: 42201.9 Da PI: 9.3623 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01002011G0250 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 46.8 | 7.5e-15 | 66 | 125 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
s+++GV+++k++gr++ +++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g
PH01002011G0250 66 SRFRGVSRHKWTGRFEGHLWDkNSWNPtqrKKgKQVYLGAYDEEEAAARAYDLAALKYWG 125
789******************888855666447*************************98 PP
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| 2 | AP2 | 41.5 | 3.4e-13 | 157 | 202 | 7 | 55 |
AP2 7 rwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
r++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g
PH01002011G0250 157 RRHQHNGRWEARIGRlF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 202
89999*******99988...3.6*************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MIVKTEINSN PRLPANMMVG ASEGSQASKG IKRRRREATL LTPITSSTNG SNFENSTTSM 60
TIKRSSRFRG VSRHKWTGRF EGHLWDKNSW NPTQRKKGKQ VYLGAYDEEE AAARAYDLAA 120
LKYWGPTTYT NFPVIDYKNE LKIMENHTKE EYLASLRRHQ HNGRWEARIG RLFGNKYLYL 180
GTYSTQEEAA RAYDIAAIEY RGINAVTNFD LRSYITWLKP SVSHTANTEA LAMATPTENL 240
FPRETQIFSQ NNPFILHHNA RQGNEEVTIS PNCSRTRASS TALSLLLKSS VFKQLVEENS 300
DANNKTGGDI SEPVSQTEAN EYHNFFHGGA PDMLGLFSPT GSYNNSIGYQ ENNPYSDNSE 360
RMTWNGPASV PVLQ*
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