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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PH01001229G0220 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 277aa MW: 29770.7 Da PI: 7.9447 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01001229G0220 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.9 | 4.6e-17 | 102 | 152 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
g GVr+++ +g+++AeIrd + k +r++lg+f+t+e Aa a+++a+ + +g
PH01001229G0220 102 GLIGVRRRP-WGKFAAEIRDsT--R-KGARVWLGTFDTPEAAAMAYDQAAFSVRG 152
567******.**********32..2.24**********************99887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006952 | Biological Process | defense response |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MEQACYSSSS SSLLTTQQHH SYTTSTAMNL LLIPSVPPGA CHLDTTASSS LPLDTNEDDM 60 HILNTLLLEM DMEASSSSSS SSSTSSSPDQ PPKRRDHQPI KGLIGVRRRP WGKFAAEIRD 120 STRKGARVWL GTFDTPEAAA MAYDQAAFSV RGAAAVLNFP VDRVQESLRT LALAAAGGSP 180 VLALKRRHSI RKRSPSKKKT ISHKQQQLAA IKEPVPKPCP WPGVVELEDL GADYLEELLR 240 VSESEPVVVH GSSPPACNQL HRGGDLPSLL GCWLAS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT034174 | 4e-73 | BT034174.1 Zea mays full-length cDNA clone ZM_BFc0032N13 mRNA, complete cds. |
GenBank | JX469950 | 4e-73 | JX469950.1 Zea mays subsp. mays clone UT3211 AP2-EREBP-type transcription factor mRNA, partial cds. |