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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01000355G0090 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 347aa MW: 37160.5 Da PI: 8.0891 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01000355G0090 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.6 | 4.1e-20 | 174 | 223 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++a+ +l+g
PH01000355G0090 174 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEDAALAYDKAAFRLRG 223
59******9.**********965...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MAAAIDMYKY NTSTHQIASS ASDQELMKVL GPFIRSAAAS SSSSSPSPSP YYSSSMTHDS 60 YMHTPTSYTS LTTLPLPTTT TTTATTSSSF SQLPPLYSSQ YAASAASAMT GSIGLTHLGP 120 AQIQQIQAQF LVQQRQQQQQ QRGLPGAFLG PRAQTMKQFG SPPRAAAVAA QSKLYRGVRQ 180 RHWGKWVAEI RLPKNRTRLW LGTFDTAEDA ALAYDKAAFR LRGDLARLNF PSLRRGGAHL 240 AGPLHASVDA KLTAICQSLA APSSKNAAAT AAESAASAAE PESPKCSSST EGEESVSAGS 300 PPPPTSLAPP VPEMERLDFT EAPWDESETF HLCKYPSWEI DWDSILS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP101598 | 0.0 | FP101598.1 Phyllostachys edulis cDNA clone: bphylf056m08, full insert sequence. |