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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PH01000115G0420 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 333aa MW: 36112 Da PI: 5.513 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01000115G0420 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.9 | 2.9e-19 | 105 | 154 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++G+r+++ +g+W+AeIrdp + +r++lg+f t+eeAa+a++ +++l+g
PH01000115G0420 105 HFRGIRQRP-WGKWAAEIRDPH----KgTRVWLGTFNTPEEAARAYDVEARRLRG 154
69*******.**********72....35*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MCGGAILTKL IPSPARAASK RVTAGHVWPA SSKKGGKNNK RHHRGVAEAD DFEAAFEEFD 60 DDFDEAEEEE EEDHFVFASK SAFSPAYDDG RAARAASKKK RGRRHFRGIR QRPWGKWAAE 120 IRDPHKGTRV WLGTFNTPEE AARAYDVEAR RLRGSKAKVN FPTAARARPR RANPRTAPKP 180 QCPAQTAYSA AAQPALRGGQ KQEALVVESQ MMGSLFDMDS FLDLTAAAAA LLPVMESSFT 240 DSAESESGSP AKKLRADDSS EGSGGGATLG FADELEFDPF MLFQPPYSNG YESIESLFAG 300 EAGQDVSSVM NNDMNSVSLW SFDEFPVDGA AF*
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