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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01000080G1510 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 337aa MW: 36343.5 Da PI: 6.6351 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01000080G1510 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.4 | 3.6e-18 | 159 | 208 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+ ae+Aa +++a+ +l+g
PH01000080G1510 159 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDNAEDAALTYDKAAFRLRG 208
59******9.**********965...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009409 | Biological Process | response to cold |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009611 | Biological Process | response to wounding |
GO:0009736 | Biological Process | cytokinin-activated signaling pathway |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0010017 | Biological Process | red or far-red light signaling pathway |
GO:0045595 | Biological Process | regulation of cell differentiation |
GO:0071472 | Biological Process | cellular response to salt stress |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MADRDLYNTT NQLSSSSSSS SDQELMKALE PFIRSASPTS STSTSSPFHS YSSPLPQESY 60 YYPVSSYTTV PAPTAPTATS FSKLPPLPPS SQYTSEVAAY PPVNGAVGLT HLGPEQIQQI 120 QAQFLFQQQQ RGLAASLLGP RAQPMKQAGE APSFSAAKLY RGVRQRHWGK WVAEIRLPKN 180 RTRLWLGTFD NAEDAALTYD KAAFRLRGDA ARLNFPNLRR GGAHIAGPLH ASVDAKLTAI 240 CQNIAATPTA SKSNTATATA PPDSPKASAS TTTTEGDESV LSAGSPPLPL LPPSQQLAQP 300 LPEMANLDFT EAPWDESDAF HLHKYPSWEI DWDSILS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP101556 | 0.0 | FP101556.1 Phyllostachys edulis cDNA clone: bphylf026l06, full insert sequence. |