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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01000038G0910 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 315aa MW: 33979.2 Da PI: 4.3453 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01000038G0910 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.8 | 6.3e-19 | 87 | 137 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W+AeIrdp+ + r++lg+f tae Aa a++ a++ l+g
PH01000038G0910 87 TRFRGVRRRP-WGKWAAEIRDPV----KgVRVWLGTFPTAEAAALAYDDAARDLRG 137
589*******.**********75....44************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MCGGVILAEH IPTTPARRVT VGHLWPAGKA GKKRQRGGPA ADDFEAAFGR FDEDSEEEED 60 DEVIERKALE FGANGNGKAA SRRTKRTRFR GVRRRPWGKW AAEIRDPVKG VRVWLGTFPT 120 AEAAALAYDD AARDLRGAGA KLNFPSSSSA TACARKRRAT AAKATPYVVD LVDEEDDTPS 180 VKNEAEASES SETSSALPDF SWQGMSASDD GAAQPVHLEV ESDQSVDLGD ATKRLRIEPL 240 QTNEVLPAAS EDSDILFDDP FVFGDQFNFF NGGAYESLDS RFGGDAVQSN GAVDESLGLW 300 SFDDDCLVED SVCY*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 30 | 36 | GKKRQRG |
2 | 81 | 95 | RRTKRTRFRGVRRRP |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP091898 | 2e-62 | FP091898.1 Phyllostachys edulis cDNA clone: bphyem115l08, full insert sequence. |
GenBank | FP097786 | 2e-62 | FP097786.1 Phyllostachys edulis cDNA clone: bphylf031b23, full insert sequence. |