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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PGSC0003DMP400043359 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
MYB |
Protein Properties |
Length: 372aa MW: 41161.2 Da PI: 8.6506 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PGSC0003DMP400043359 | genome | PGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 64.6 | 1.9e-20 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEdell ++v+++G+++W++I++ ++ gR++k+c++rw +
PGSC0003DMP400043359 12 KGPWSPEEDELLQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57
79******************************.***********985 PP
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2 | Myb_DNA-binding | 56.9 | 4.6e-18 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++T+eEde +++a++++G++ W+tIar ++ gRt++ +k++w++
PGSC0003DMP400043359 66 AFTPEEDETIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 108
79******************.*********.***********986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0010200 | Biological Process | response to chitin |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MASSKRDMDR VKGPWSPEED ELLQQLVQKH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 QVEHRAFTPE EDETIIRAHA RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSLSADE 120 GNELADQIFE NQQPPLKRSV SAGSAMPVSG FHFSPGSPSG SDSDSSLHVT SSSQSHVFKP 180 VARTGGVFPQ SIDISSPPVD PPTSLSLSLP GVDLAEFSNR SADSTQSKNP FQLLLPPMQI 240 PPPPPPPPPP PPQATTVPFE RVSAIQQSLQ NPDFGKNAGG EQPDKVFVPF SQELLGVMQE 300 MIKTEVRNYM MGVEQKQQFQ QQQQHYQQQP QQFQQQNHQL PSGLGLGLCM QQASDGFRDR 360 AANRMRLSKF D*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF122051 | 0.0 | AF122051.1 Solanum tuberosum clone 22 tuber-specific and sucrose-responsive element binding factor (TSF) mRNA, complete cds. |