PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_20351
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HD-ZIP
Protein Properties Length: 704aa    MW: 76980.8 Da    PI: 7.3284
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_20351genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.4e-18764457
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  PEQU_20351  7 YVRYTPEQVEALERVYMECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 64
                6789****************************************************97 PP
2START141.68.1e-451553702205
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee++ e+++ka+ ++  Wv+++ +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+ ++ W ++++   +  vi  g  g ++l+++++
  PEQU_20351 155 IAEETLSEFLSKATGTSVEWVQLVGMKPGPDSIGIVAVSHNCSGVAARACGLVSLEPT-KVAEILKARQSWYRDCRCLNIATVIPAGngGNIELIYMQT 252
                 68999*****************************************************.8899999888*******8888888877777********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX.......HHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlp.......hwllrslvk 186
                 +a+++l++ Rdf+ +Ry+  l++g++vi+++S++s +  p     +++vRae+lpSg+li+p+++g+s +++v+hvdl+  +        +++lr+l++
  PEQU_20351 253 YAPTTLAAaRDFWNLRYTTGLEDGSLVICERSLTSSTGGPLgppAPNFVRAEMLPSGYLIRPCDGGGSMIHIVDHVDLDVCSSmilivfvPEVLRPLYE 351
                 **************************************999999**********************************9765444667779******** PP

                 HHHHHHHHHHHHHTXXXXX CS
       START 187 sglaegaktwvatlqrqce 205
                 s  + + k++ a+l+++++
  PEQU_20351 352 SPKIVAYKMTIAALRHLRQ 370
                 *************999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.289165IPR001356Homeobox domain
SMARTSM003891.3E-15369IPR001356Homeobox domain
SuperFamilySSF466891.15E-16668IPR009057Homeodomain-like
CDDcd000861.17E-16666No hitNo description
PfamPF000463.6E-16764IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.8E-18864IPR009057Homeodomain-like
CDDcd146862.58E-65897No hitNo description
PROSITE profilePS5084823.599145380IPR002913START domain
Gene3DG3DSA:3.30.530.209.9E-21153331IPR023393START-like domain
SMARTSM002344.1E-37154371IPR002913START domain
PfamPF018523.0E-42155370IPR002913START domain
SuperFamilySSF559616.73E-33155338No hitNo description
SuperFamilySSF559614.4E-5409493No hitNo description
SuperFamilySSF559614.4E-5522593No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    Send to blast
QIDAGKYVRY TPEQVEALER VYMECPKPSS LRRQQLIREC PILSNIEPKQ IKVWFQNRRC  60
REKQRKEASR LQTVNRKLTA MNKLLMEEND RLQKQVSHLV YENGYMRQQL HIASAATTDN  120
SCESVVTSGQ HQQQHNAKLQ HFQRDANNPA GLLAIAEETL SEFLSKATGT SVEWVQLVGM  180
KPGPDSIGIV AVSHNCSGVA ARACGLVSLE PTKVAEILKA RQSWYRDCRC LNIATVIPAG  240
NGGNIELIYM QTYAPTTLAA ARDFWNLRYT TGLEDGSLVI CERSLTSSTG GPLGPPAPNF  300
VRAEMLPSGY LIRPCDGGGS MIHIVDHVDL DVCSSMILIV FVPEVLRPLY ESPKIVAYKM  360
TIAALRHLRQ IAHEMSGEVV YSGGRQPAVL RTFSQRLSRG FNDAINGFMD DGWSLMSSDG  420
GDDVTITINS SPSKLLGSVN SSPSFAFGGG ILCAKASMLL QNVPPALLVR FLREHRSEWA  480
DFGADAYSTA TLRASSYPIL GVRAGGSFHG GQVILPLAQT VENEEFLEVI RLEGHGFSQD  540
DVARDMYLLQ LCSGVDENAV GACSQLVFAP IDESFADDAP LLPSGFRVTL LESKTEANVA  600
ARTLDLASAL EVGSGGATRP SLEAASNMSN LRSVLTIAFQ FTYENHFREN MAAMARQYVR  660
SIVTSVQRVA MAISPSRAGS LGAKHLTGSP EGLTLARWIS RSYK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020578108.10.0LOW QUALITY PROTEIN: homeobox-leucine zipper protein HOX32-like
SwissprotQ6AST10.0HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBLA0A2I0XDB70.0A0A2I0XDB7_9ASPA; Homeobox-leucine zipper protein HOX32
STRINGXP_008794452.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37438197
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Itoh J,Hibara K,Sato Y,Nagato Y
    Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
    Plant Physiol., 2008. 147(4): p. 1960-75
    [PMID:18567825]
  3. Li YY, et al.
    Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
    Rice (N Y), 2016. 9(1): p. 46
    [PMID:27624698]