PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_15387
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HD-ZIP
Protein Properties Length: 843aa    MW: 92620.5 Da    PI: 6.42
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_15387genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.4e-182077457
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  PEQU_15387 20 YVRYTPEQVEALERVYSECPKPSSMRRQQLIRECpilaNIEPKQIKVWFQNRRCREKQ 77
                6789****************************************************97 PP
2START161.66e-511693762204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W +++++ ++l vi  g  g ++l+++++
  PEQU_15387 169 IAEETLAEFLSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPT-KVAEILKDRLNWYRDCRSHDVLTVIPAGngGNIELIYMQT 266
                 68999*****************************************************.8999999999*****************999********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 + +++l++ Rdf+++Ry+  l++g++vi+++S+++ +  p+     ++vRae lpSg+li+p+++g+s + +v+hvdl++++++++lr+l++s ++ ++
  PEQU_15387 267 YSPTTLASaRDFWSLRYTAGLEDGSLVICERSLTPSTGGPTgppATNFVRAEILPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPEVLRPLYESPRILAQ 365
                 ************************************9999989999***************************************************** PP

                 HHHHHHTXXXX CS
       START 194 ktwvatlqrqc 204
                 k + a+l++ +
  PEQU_15387 366 KLTIAALRHIR 376
                 *****999765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003892.1E-151682IPR001356Homeobox domain
SuperFamilySSF466891.63E-161980IPR009057Homeodomain-like
CDDcd000861.33E-161979No hitNo description
PfamPF000463.4E-162077IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.8E-182177IPR009057Homeodomain-like
PROSITE profilePS5007115.2732278IPR001356Homeobox domain
CDDcd146863.68E-671110No hitNo description
PROSITE profilePS5084826.515159387IPR002913START domain
Gene3DG3DSA:3.30.530.202.6E-22167351IPR023393START-like domain
SMARTSM002344.2E-46168378IPR002913START domain
SuperFamilySSF559614.94E-38169379No hitNo description
PfamPF018521.0E-48169376IPR002913START domain
SuperFamilySSF559611.79E-6416495No hitNo description
SuperFamilySSF559611.79E-6529601No hitNo description
PfamPF086705.0E-49701842IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009855Biological Processdetermination of bilateral symmetry
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0010072Biological Processprimary shoot apical meristem specification
GO:0080060Biological Processintegument development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 843 aa     Download sequence    Send to blast
MAMVISGKEA GKQLMDAGKY VRYTPEQVEA LERVYSECPK PSSMRRQQLI RECPILANIE  60
PKQIKVWFQN RRCREKQRKE SSRLQTVNRK LTAMNKLLME ENDRLQKQVS QLVYENGYMR  120
QQIHTTSVAT TDTSCESVVT SGQHHQQQQN PTPQHPPRDA NNPAGLLAIA EETLAEFLSK  180
ATGTAVEWVQ MVGMKPGPDS IGIIAVSHNC SGVAARACGL VSLEPTKVAE ILKDRLNWYR  240
DCRSHDVLTV IPAGNGGNIE LIYMQTYSPT TLASARDFWS LRYTAGLEDG SLVICERSLT  300
PSTGGPTGPP ATNFVRAEIL PSGYLIRPCE GGGSMIYIVD HVDLDAWSVP EVLRPLYESP  360
RILAQKLTIA ALRHIRQISQ ESNSEISYAG GRQPTVLRTF SQRMNRGFND AINGFPDDGW  420
SLMGSDGVED VTIAINSYPN KLCGHSGSSM FSSLGGGILC AKASMLLQNV PPALLVQFLR  480
EHRSEWADSS VDVYSAASLR ASPYAVPCLR VGSAFLGSHV IIPLAHTVEN EEVLEVVRLE  540
SPGFTQEDVL SRDMYLLQLC SGIDENAVGA CAQLVFAPID ESFADDAFLL PSGFRVIPLD  600
AKTNPPSTTR TLDLASALEV GGGGTGRVAN DSGLNSGNSR SVLTIAFQFT FENHLRENVT  660
AMARQYVRSV VASVQRVAMA ISPSRNQLGM RHTPGSPEAH TLSLWISRSY RFHTGIELIR  720
TDSQAGETLK LLWHYSDAIM CCSLKSSPLF TFANQAGLDL LETTLVALQD ISLEKILDDS  780
GRKVLCSEFP KIMQQGFAYL PAGICMSSLG RPVSYEQAIA WKVLNEDDCP HCLAFMFVNW  840
SFV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020575104.10.0homeobox-leucine zipper protein HOX32-like
SwissprotQ6AST10.0HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBLA0A2I0W1160.0A0A2I0W116_9ASPA; Homeobox-leucine zipper protein HOX32
STRINGXP_008794452.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37438197
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Itoh J,Hibara K,Sato Y,Nagato Y
    Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
    Plant Physiol., 2008. 147(4): p. 1960-75
    [PMID:18567825]
  3. Li YY, et al.
    Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
    Rice (N Y), 2016. 9(1): p. 46
    [PMID:27624698]