PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

PEQU_11640

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

NAC

Protein Properties

Length: 1033aa MW: 114733 Da PI: 6.2039

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_11640	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	39.4	1.8e-12	193	290	36	128
NAM 36 ev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWkatgkdkevlskkgelvglkktLvfykgrapkge..ktdWvmhey 126 e ++ +v+P+ Lp vk++ ++ yfF+k+ ++ g++ +r+ k + yW++ gk + v + +g + g k++ ++y a+ g+ +t Wvmh+y PEQU_11640 193 EDdGLDNVHPQFLP-GVKQDGSKSYFFHKKVDMNS-GRKLKRQKKhdssfEIYWHSDGKLNLVSV-DGIHQGFKEVSTLYMTPANGGShvRTPWVMHQY 288 44258899****.777888999*998876.33333322223344789**999998.999*******76555444339****** PP NAM 127 rl 128 ++ PEQU_11640 289 HI 290 96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	15.005	150	307	IPR003441	NAC domain
SuperFamily	SSF101941	3.27E-14	182	307	IPR003441	NAC domain
Pfam	PF02365	9.7E-5	201	290	IPR003441	NAC domain
SMART	SM00739	0.0053	943	970	IPR005824	KOW
CDD	cd06087	7.21E-29	944	998	No hit	No description
Pfam	PF00467	5.6E-5	946	979	IPR005824	KOW
Pfam	PF16121	3.5E-23	981	1027	IPR032277	40S ribosomal protein S4, C-terminal domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1033 aa Download sequence Send to blast
MAFQKAGDNP NIPSRFGEKT AMQLQHETRA DDLDVLPLSQ RKRMLIHPDV LSKGLNVKQL 60 IPNFSKMTCA QSHCLYATCF LPQAALGHTI LAGVISLPTL ISCYLVIYTV CLHPTGPVSF 120 TQESPISCTQ CLLPHVALNN ACASGQQYPV PSGLVCLEAS NLIHQMKTCF GTCGRGVAKR 180 HPFINEFIIS LDEDDGLDNV HPQFLPGVKQ DGSKSYFFHK KVDMNSGRKL KRQKKHDSSF 240 EIYWHSDGKL NLVSVDGIHQ GFKEVSTLYM TPANGGSHVR TPWVMHQYHI CINGAEEDMV 300 VSKIFYEMNS KPDIQDSRTD SLDGFVAEVV AVAAPFQAAP ESFESLHVES VSVEASIQVE 360 DRCIGSETNV KHEGYLKSDS FQTYFPTANS EINVKDEKDP VAGKRNINMR MRRKHFEGLL 420 ATSNAYFAVR ALEQHGIFSL DNVHVIIAGF ASLFSMCLHS SILTQHCCGA FVRPDSLLDV 480 DALWHCDFGI NINNSNYDEV IDDDANFNDA LLSMEKPCTE RAPDNVCQKN VVDETYRTRS 540 GEIDKTGICS FSGYKSREKF EEDSKCLDQP HASLNKISSA EHGIAREDTV NDLFILGLPA 600 YNLKGKPSKK TYPEIAFEKN SSNWVNISSQ SAFPIKIEPK SFEEEAEIGF ASALIRSTAS 660 ASSGLLTKVK TESIEGADAS NMLRLFSTKL SGLGEQLSET NCLINQHPEK DDDVRDDFLI 720 SNRNLQVRLD SECYPEINVH AEEPKSISVL SSSLLSVKSE PVGSKLLTDL QIYSCNTREH 780 VSLMFEDKTE LYSDSAPDII DHVPLKCRLG LFVSEGDVNV KSWNFSEEVA LGSVNTKEFL 840 SSSRRKRRRT ATNSVEKAME EDAPGLLKAL LDRGIQVEEI KLYGDLEDID PLETFSSEGS 900 FEELETVMSK LDCLLVDYQY RAKEYPPKLV EQNRRLHQIH FIKFDVGNVV IVTGGRNRGR 960 VGVIKNREKH KGTFETIHVQ DAAGHEFATR LGNVFTIGKG TKPRVSLPKG KGIKLSIIEE 1020 ARKLLAAASA ATA

Sequence ? help Back to Top

Protein Sequence Length: 1033 aa Download sequence Send to blast

MAFQKAGDNP NIPSRFGEKT AMQLQHETRA DDLDVLPLSQ RKRMLIHPDV LSKGLNVKQL  60
IPNFSKMTCA QSHCLYATCF LPQAALGHTI LAGVISLPTL ISCYLVIYTV CLHPTGPVSF  120
TQESPISCTQ CLLPHVALNN ACASGQQYPV PSGLVCLEAS NLIHQMKTCF GTCGRGVAKR  180
HPFINEFIIS LDEDDGLDNV HPQFLPGVKQ DGSKSYFFHK KVDMNSGRKL KRQKKHDSSF  240
EIYWHSDGKL NLVSVDGIHQ GFKEVSTLYM TPANGGSHVR TPWVMHQYHI CINGAEEDMV  300
VSKIFYEMNS KPDIQDSRTD SLDGFVAEVV AVAAPFQAAP ESFESLHVES VSVEASIQVE  360
DRCIGSETNV KHEGYLKSDS FQTYFPTANS EINVKDEKDP VAGKRNINMR MRRKHFEGLL  420
ATSNAYFAVR ALEQHGIFSL DNVHVIIAGF ASLFSMCLHS SILTQHCCGA FVRPDSLLDV  480
DALWHCDFGI NINNSNYDEV IDDDANFNDA LLSMEKPCTE RAPDNVCQKN VVDETYRTRS  540
GEIDKTGICS FSGYKSREKF EEDSKCLDQP HASLNKISSA EHGIAREDTV NDLFILGLPA  600
YNLKGKPSKK TYPEIAFEKN SSNWVNISSQ SAFPIKIEPK SFEEEAEIGF ASALIRSTAS  660
ASSGLLTKVK TESIEGADAS NMLRLFSTKL SGLGEQLSET NCLINQHPEK DDDVRDDFLI  720
SNRNLQVRLD SECYPEINVH AEEPKSISVL SSSLLSVKSE PVGSKLLTDL QIYSCNTREH  780
VSLMFEDKTE LYSDSAPDII DHVPLKCRLG LFVSEGDVNV KSWNFSEEVA LGSVNTKEFL  840
SSSRRKRRRT ATNSVEKAME EDAPGLLKAL LDRGIQVEEI KLYGDLEDID PLETFSSEGS  900
FEELETVMSK LDCLLVDYQY RAKEYPPKLV EQNRRLHQIH FIKFDVGNVV IVTGGRNRGR  960
VGVIKNREKH KGTFETIHVQ DAAGHEFATR LGNVFTIGKG TKPRVSLPKG KGIKLSIIEE  1020
ARKLLAAASA ATA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4v7e_BE	2e-41	918	1023	142	254	40S ribosomal protein S4E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	844	848	RKRRR
2	844	849	RKRRRT

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020591271.1	0.0	LOW QUALITY PROTEIN: uncharacterized protein LOC110032100
TrEMBL	A0A2I0W2V0	0.0	A0A2I0W2V0_9ASPA; NAC domain-containing protein 8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	6e-31	NAC family protein