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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PEQU_11578 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family |
GRAS |
Protein Properties |
Length: 384aa MW: 40898.6 Da PI: 6.2362 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PEQU_11578 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 167.1 | 1.4e-51 | 27 | 309 | 3 | 297 |
GRAS 3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
elLl++A+ v++gdl+ ++Larl+ l s +g+p++R+a++f+ AL + l + +p + s + ++++aa+k+fs++sPi++f +taNq
PEQU_11578 27 ELLLRAAHSVETGDLNYSLSILARLNFLlHSCTGTPLRRAAFHFKDALLSLLPI----PDHPIPEPPLSAIELVRRIAAHKAFSDISPIPQFNSFTANQ 121
79************************9989*******************99987....44566777777778*************************** PP
GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
++le+++ + ++H iDfd++ G QW ++ + La+ + +pp lRiT+v+s +++ e+ +++L++fA+ +g+++ ++++ rl + ++r
PEQU_11578 122 TLLESLDAAPALHLIDFDLGLGSQWSSFAHDLAAHSraahLPPPPLRITAVVS---DETAETAIAADNLRDFARGIGLRLTIEFV---RL--TAICRIR 212
*********************************65544666799*********...578999999*******************7...44..455899* PP
GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleak...lpreseerikvErell 290
+ gEa+aV l + rl +vL+++++ ++vv vv+ e + +++sF +rf++ ley++a ++ +ea+ +++ +e+++ +Er+l+
PEQU_11578 213 FAAGEAVAVVLTPANIRLN-----G----VSVLRFIRGAAARVVLVVDGEGYCgGAGSFRQRFANGLEYFAAAMEVVEAGtaaVGAGEETARRIERVLF 302
***********99888885.....3....46**********************8999********************7763445667799********* PP
GRAS 291 greivnv 297
+++i +
PEQU_11578 303 RPRIFAA 309
**99765 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 384 aa
Download sequence Send
to blast |
MDEPCSFFPD LSHLIPPPPD PENSHLELLL RAAHSVETGD LNYSLSILAR LNFLLHSCTG 60 TPLRRAAFHF KDALLSLLPI PDHPIPEPPL SAIELVRRIA AHKAFSDISP IPQFNSFTAN 120 QTLLESLDAA PALHLIDFDL GLGSQWSSFA HDLAAHSRAA HLPPPPLRIT AVVSDETAET 180 AIAADNLRDF ARGIGLRLTI EFVRLTAICR IRFAAGEAVA VVLTPANIRL NGVSVLRFIR 240 GAAARVVLVV DGEGYCGGAG SFRQRFANGL EYFAAAMEVV EAGTAAVGAG EETARRIERV 300 LFRPRIFAAG AAGGGTGREX XXXXXXXXGG GGGGGGVPRG EEGGGIGAEL EGKGDVCHVG 360 MEVQLRPEGE FWVRLVALRL MIAR
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5b3g_A | 8e-16 | 31 | 314 | 25 | 308 | Protein SCARECROW |
5b3h_A | 7e-16 | 31 | 314 | 24 | 307 | Protein SCARECROW |
5b3h_D | 7e-16 | 31 | 314 | 24 | 307 | Protein SCARECROW |