PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s930161g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family ARR-B
Protein Properties Length: 630aa    MW: 70024.9 Da    PI: 5.1375
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s930161g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like55.21.5e-17220270355
            G2-like   3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        +++W + L ++F +a+e L G++ A+P++i+++m+v+g+t++hv SHLQkYRl
  PDK_30s930161g001 220 QVVWDEFLEKKFRDAMEAL-GID-AVPSKIVKHMNVEGITRAHVTSHLQKYRL 270
                        689****************.888.****************************8 PP
2Response_reg52.92e-18111131105
                        EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
       Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 
                        +l+vd +pl ++ +r++l + +y +v++++++ +al+ll+e++  +Dl+l+ + mp+ +G+ell+  +    +lp+i++++ +  e+++  +
  PDK_30s930161g001  11 LLVVDNDPLYLKEIREILVSCNY-KVTTCANPGSALKLLQERQndFDLLLVEVHMPEFSGFELLTVVND---ELPVIMMSTDKRLETVKISY 98 
                        599********************.***************888888******************988766...68****************** PP

                        HTTESEEEESS--HH CS
       Response_reg  91 kaGakdflsKpfdpe 105
                        ++Ga  +l+Kp d +
  PDK_30s930161g001  99 ELGACFYLVKPLDVD 113
                        ***********9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.8E-277148No hitNo description
SuperFamilySSF521722.56E-257131IPR011006CheY-like superfamily
SMARTSM004483.1E-189122IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011033.24310123IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.35E-2012113No hitNo description
PfamPF000725.5E-1612113IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF466896.63E-11217274IPR009057Homeodomain-like
TIGRFAMsTIGR015574.4E-17218272IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.605.9E-17218274IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 630 aa     Download sequence    Send to blast
MDYKFPKGLR LLVVDNDPLY LKEIREILVS CNYKVTTCAN PGSALKLLQE RQNDFDLLLV  60
EVHMPEFSGF ELLTVVNDEL PVIMMSTDKR LETVKISYEL GACFYLVKPL DVDTANNLWQ  120
HMVSSRHPQR DKFDGENEEA SSEEGPQIAD ACRNDPRKRK KNYKRKNVLI TDSSSKHNST  180
NHKNISEKGS SKSSEGKQGG KREQITGQED QKSKKLSKGQ VVWDEFLEKK FRDAMEALGI  240
DAVPSKIVKH MNVEGITRAH VTSHLQKYRL KQKKKPWSPS IPIMLGPGAE MGQFNQSSIQ  300
YGLLNLQPGY LNSSDMTTSV PLHQNKKANN NQGTSNFGRT GETQGLYSLS THANNMNSFL  360
EFGAVNSGSF EASIQTQQIN NDAELSSSFG ALIQGQKFDS GTQDLENFRA IHQPTQLSNT  420
MAQVSDSGGN FPWIASGSTD TGLIGSNSND IDAMPNNASE QHTHLVSENS LASYADIEGT  480
AMSTNHFSVT DSGQQQMMKH NACEENTVLV SEIMTNVISF NSVTDSEPQP MIQYNAMEEN  540
TLLVSENMTN VVAADGGVIN ANQSSTNNSE QQCSGYHVVE NSQMIEEEHF NHMTEKFACS  600
DETWRLMLKD SSQLDFSRMT EVIGNDSNSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156160RKRKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026666359.10.0uncharacterized protein LOC113463775
TrEMBLA0A3Q0IHF70.0A0A3Q0IHF7_PHODC; uncharacterized protein LOC113463775
STRINGXP_008805335.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5089122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.14e-39response regulator 2