PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s787781g005 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | bZIP | ||||||||
Protein Properties | Length: 426aa MW: 43964.2 Da PI: 7.3033 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 69.3 | 6.2e-22 | 302 | 365 | 1 | 64 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 e+elkrerrk +NRe+ArrsR+RK++e+eeL++kv+eL +eN+aL e+e+lkk + lk+e+e PDK_30s787781g005 302 ERELKRERRKLSNRESARRSRLRKQQECEELARKVDELNGENSALTLEVENLKKFCRDLKAENE 365 89**********************************************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 2.0E-17 | 45 | 127 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 5.5E-8 | 142 | 272 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-16 | 297 | 362 | No hit | No description |
Pfam | PF00170 | 7.7E-20 | 302 | 365 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 5.3E-20 | 302 | 366 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.806 | 304 | 367 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.75E-11 | 305 | 361 | No hit | No description |
CDD | cd14702 | 3.02E-20 | 307 | 358 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 309 | 324 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010310 | Biological Process | regulation of hydrogen peroxide metabolic process | ||||
GO:0010629 | Biological Process | negative regulation of gene expression | ||||
GO:0090342 | Biological Process | regulation of cell aging | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence Send to blast |
MGSAEETTTA GAAAEKPSRT EAAASTSPAS PALAAAPPPP PPSSSRESPT PAQTPPQVAA 60 HVFSDWAASL QAFYGSGAAA AAAAAAAAAA APHPFVWGAQ HLVSPYGTPI AYSPMYSHGA 120 LYSHPSMAVG MAYPTTEPSD NKGSSGNAGG SPGKSGDGGK VSSSTAENAS RSSGDSGSEG 180 SSDTRDDNTE PRDLSSSKKR SYGNMMAEVE TAQPITAAQY GGAVAEPSYS SRGRSATKLP 240 VSAPGRIVLT SPPTNLNIGM DLWNASHAGA VPVRARPTKA GIATATGRWD GVTTEQQRIQ 300 DERELKRERR KLSNRESARR SRLRKQQECE ELARKVDELN GENSALTLEV ENLKKFCRDL 360 KAENESLEAG LTRFFGAGVA SALGCKVESS AAESSAVPSV GGDGSDHVHK SQVDSNRNNG 420 KFHSGI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 304 | 311 | LKRERRKL |
2 | 318 | 324 | RRSRLRK |
3 | 318 | 325 | RRSRLRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00039 | PBM | Transfer from AT4G36730 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008786127.1 | 0.0 | G-box-binding factor 1-like isoform X1 | ||||
TrEMBL | A0A2H3XN78 | 0.0 | A0A2H3XN78_PHODC; G-box-binding factor 1-like isoform X1 | ||||
STRING | XP_008786126.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2160 | 36 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.2 | 1e-31 | G-box binding factor 1 |