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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PDK_30s734381g001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family |
ERF |
Protein Properties |
Length: 326aa MW: 35729.7 Da PI: 5.7563 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PDK_30s734381g001 | genome | PDK | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.6 | 2.1e-20 | 152 | 201 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r r +lg+f+taeeAa a+++a+ kl+g
PDK_30s734381g001 152 LYRGVRQRH-WGKWVAEIRLPRN---RSRLWLGTFDTAEEAALAYDRAAYKLRG 201
59******9.**********955...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MATAIDIFNS SSDPLREELL QALEPFIRGA SVPFSSYIAS SNTTTPEPLS PSSFPSPPPL 60 PWSYSPLFSS SSWTSTLSSD MIPQGYSQNF IRLSHLSPAQ IQQIQAKLLL QQQQQQQATA 120 ASTQQQSSLL GMRPQLMKRS GSPRPPPKPS KLYRGVRQRH WGKWVAEIRL PRNRSRLWLG 180 TFDTAEEAAL AYDRAAYKLR GDAAKLNFPQ LRHSGAHSSL SLDSSIDAKL QAISPSLVTS 240 KRQGSDSPDS VIPEGAGTKG ELGCSGSEDN KSESSSSVEG DESSSAVSEM QSLDFTEAPW 300 DESESFMLRK YPSWEIDWDS ILSSGQ
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ467618 | 6e-32 | KJ467618.1 Lilium lancifolium DRE-binding protein mRNA, partial cds. |