PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1114731g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 324aa    MW: 34376.5 Da    PI: 9.5961
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1114731g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1703.8e-22183245163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         e+elkrerrkq+NRe+ArrsR+RK+ae+e+L+ kv++L aeN+aL++e+++l++++ kl+ e+
  PDK_30s1114731g003 183 ERELKRERRKQSNRESARRSRLRKQAETEQLAVKVETLGAENMALRSEISRLSENSNKLRLEN 245
                         89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.0E-18175242No hitNo description
SMARTSM003382.5E-20183247IPR004827Basic-leucine zipper domain
PfamPF001701.9E-20183245IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.783185248IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.31E-10186241No hitNo description
CDDcd147026.79E-20188236No hitNo description
PROSITE patternPS000360190205IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
PLLPPPFGTP YTAIYPAGGV YSHPSMPFGS HMQYQGIAPS PTISEAVVMA TPLSMEMPAK  60
SPGNKDKGPM KKLKGFDGHA TAMGNGSAEN RGGDGKVDAQ ANAAHGGETS ASSKMSLGIT  120
VAPPNISGKP VGTGPSSSPT PGMEFRVATT GKVQTSGTTI SPAAGAMMPG RNRGSSELWI  180
QDERELKRER RKQSNRESAR RSRLRKQAET EQLAVKVETL GAENMALRSE ISRLSENSNK  240
LRLENSTLME KLKTARLSQE EISTANMESE GAPSVVAENF LSMIDNSSSI SRSVQQEDEA  300
HEKSSGKLHQ LLDSNPRTDA VAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199205RRSRLRK
2199206RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008798658.10.0common plant regulatory factor 1-like
TrEMBLA0A2H3YHM70.0A0A2H3YHM7_PHODC; common plant regulatory factor 1-like
STRINGXP_008798658.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.16e-60G-box binding factor 3