|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Ote100262490021 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
Family |
ERF |
Protein Properties |
Length: 217aa MW: 24626.9 Da PI: 8.4566 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ote100262490021 | genome | OteDB | - |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.2 | 5.4e-20 | 76 | 126 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s y+G+r+++ +g+W+AeIrdp++ r +lg+f t+eeAa+a++ a+k+++g
Ote100262490021|100262490021 76 SIYRGIRRRP-WGKWAAEIRDPKK---GVRLWLGTFNTPEEAARAYDGAAKRIRG 126
57********.**********954...4*************************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 217 aa
Download sequence Send
to blast |
MCGGSIISDE PIIKKKGKLS AEEFWAQLDT ISEFWGFNSS NDDVHNHAID SATNPTTIKK 60 EKHKKIEKGN EKVRKSIYRG IRRRPWGKWA AEIRDPKKGV RLWLGTFNTP EEAARAYDGA 120 AKRIRGGKAK LNFPDHLKPP QPPSPKRLRV TPEPPVEHLE SPEMNYSAQS QMIKEELSNL 180 ESFLGLETES TQFGLDEPVD LWLMDEFAAA QQSNLFI
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 3e-21 | 78 | 134 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 8e-21 | 78 | 134 | 15 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:9159183}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By 1-aminocyclopropane-1-carboxylic acid (ACC, ethylene precursor), methyl jasmonate (MeJA), and Botrytis cinerea. Also induced by cadmium. {ECO:0000269|PubMed:18836139, ECO:0000269|PubMed:9159183}. |
Publications
? help Back to Top |
- Bueso E, et al.
The lithium tolerance of the Arabidopsis cat2 mutant reveals a cross-talk between oxidative stress and ethylene. Plant J., 2007. 52(6): p. 1052-65 [PMID:17931347] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Chen YC, et al.
Root defense analysis against Fusarium oxysporum reveals new regulators to confer resistance. Sci Rep, 2014. 4: p. 5584 [PMID:24998294] - Deslauriers SD,Alvarez AA,Lacey RF,Binder BM,Larsen PB
Dominant gain-of-function mutations in transmembrane domain III of ERS1 and ETR1 suggest a novel role for this domain in regulating the magnitude of ethylene response in Arabidopsis. New Phytol., 2015. 208(2): p. 442-55 [PMID:25988998] - Bui LT,Giuntoli B,Kosmacz M,Parlanti S,Licausi F
Constitutively expressed ERF-VII transcription factors redundantly activate the core anaerobic response in Arabidopsis thaliana. Plant Sci., 2015. 236: p. 37-43 [PMID:26025519] - Gasch P, et al.
Redundant ERF-VII Transcription Factors Bind to an Evolutionarily Conserved cis-Motif to Regulate Hypoxia-Responsive Gene Expression in Arabidopsis. Plant Cell, 2016. 28(1): p. 160-80 [PMID:26668304] - Liu W, et al.
Ethylene response factor AtERF72 negatively regulates Arabidopsis thaliana response to iron deficiency. Biochem. Biophys. Res. Commun., 2017. 491(3): p. 862-868 [PMID:28390898] - Yao Y,Chen X,Wu AM
ERF-VII members exhibit synergistic and separate roles in Arabidopsis. Plant Signal Behav, 2017. 12(6): p. e1329073 [PMID:28537474]
|