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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_22789A |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
NAC |
| Protein Properties |
Length: 363aa MW: 40201.1 Da PI: 6.5081 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_22789A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 93.7 | 2.9e-29 | 64 | 209 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr 76
lp G++F+P+d+el+ ++L+++ + ++ +++ +i+e +i++++P++Lp +k++ ++ +fF++ +++y g+rk+r
Oropetium_20150105_22789A 64 LPIGIKFDPSDSELL-QHLEERSNPTNlessvivNQFIATIEEPeGICYTHPENLP-GIKTDGSSRHFFHRISNAYGCGHRKRR 145
699************.899999988885555553222224777768**********.778889999****************** PP
NAM 77 a.........tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektd...Wvmheyrl 128
+ k+ +W++tg++kev++++g++ g kk+Lv+++g+++ g+ktd Wvmh+y+l
Oropetium_20150105_22789A 146 KidnhhtasdDKKVRWHKTGRSKEVYDESGAKRGWKKILVLHTGSKKAGVKTDragWVMHQYHL 209
878888777666999******************************99999886666******98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 363 aa
Download sequence Send
to blast |
MFCMEPPGER PWIMNGKGIA EKIRDPTQVS YLRLAEVVEE ACIKCPTCQH SADCSNVPIL 60
WPKLPIGIKF DPSDSELLQH LEERSNPTNL ESSVIVNQFI ATIEEPEGIC YTHPENLPGI 120
KTDGSSRHFF HRISNAYGCG HRKRRKIDNH HTASDDKKVR WHKTGRSKEV YDESGAKRGW 180
KKILVLHTGS KKAGVKTDRA GWVMHQYHLG ADEAEKDRQF VVSKIFYQSA SKQVDKSAMN 240
VPVVEQDASA VKIDPRTPNT DPPQPLRPNN STCKTEQHTS PFLLDQGFVA EPGSDSGAQT 300
FLDNGKAVVS STQVLEPDAG PGSQLSKGSW ESGVQDVHLG SQDNLLALLE LESFYNSDLD 360
AF*
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