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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Oropetium_20150105_18426A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
MYB |
| Protein Properties |
Length: 304aa MW: 32224.2 Da PI: 9.4641 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_18426A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 59.7 | 6.3e-19 | 11 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEde l ++v+++G ++W++I r ++ gR++k+c++rw +
Oropetium_20150105_18426A 11 KGPWSPEEDEALRRLVERHGARNWTAIGRGIP-GRSGKSCRLRWCNQ 56
79******************************.***********985 PP
|
| 2 | Myb_DNA-binding | 55.8 | 1.1e-17 | 63 | 106 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++T+eEd +++a+++lG++ W++Iar ++ gRt++ +k++w++
Oropetium_20150105_18426A 63 RRPFTPEEDATILRAHARLGNR-WAAIARLLP-GRTDNAVKNHWNS 106
679*******************.*********.***********96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MGAEAECDRI KGPWSPEEDE ALRRLVERHG ARNWTAIGRG IPGRSGKSCR LRWCNQLSPQ 60
VERRPFTPEE DATILRAHAR LGNRWAAIAR LLPGRTDNAV KNHWNSSLKR KLSTATAATP 120
TNLEAGDAEA AERPCKRVSP GPGSPTGSDR SELSHSSVGG GGGAQVFRPV PRTGGFDAIS 180
APEVRPPPPR DEDPLTSLSL SLPGQDQASS GFRHDSARSR FHELSPSRSP SPPSPPTPAA 240
PSPYPFSGEL VAAMQEMIRA EVRKYMSGAG LPAGCGPGAV GEACIVEGVM RAAAERVGVI 300
TRQ*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
